| Sequence 1: | NP_648109.1 | Gene: | CTCF / 38817 | FlyBaseID: | FBgn0035769 | Length: | 818 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_572453.1 | Gene: | CG18262 / 31745 | FlyBaseID: | FBgn0030012 | Length: | 469 | Species: | Drosophila melanogaster |
| Alignment Length: | 375 | Identity: | 105/375 - (28%) |
|---|---|---|---|
| Similarity: | 158/375 - (42%) | Gaps: | 74/375 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 179 VVKVPAPRGRPRKNPVIPKPEPMDLERELEE-------------------LVDEPDISSMVTELS 224
Fly 225 DYTVDEAAVEAATATLTPNEAEVYEFEDNATTEDENADKKDVDF--------------VLSNKEV 275
Fly 276 KLKTASSTSQNSNASGHKYSCPHCPYTASKKFLITRHSRSHDVEPS-FKCS--ICERSFRSNVGL 337
Fly 338 QNHINTHMGNKPHKCKLCESAFTTSGELVRHTRYKHTKEKPHKCTECTYASVELTKLRRHMTCHT 402
Fly 403 GERPYQCPHCTYASQDMFKLKRHMVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVVDKPVFQC 467
Fly 468 NYCPTTCGRKADLRVHIKHMHTSDVPMTCRRCGQQLPDRYQYKLHVKSHE 517 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CTCF | NP_648109.1 | 23ISL | <116..206 | CDD:293226 | 8/26 (31%) |
| C2H2 Zn finger | 296..316 | CDD:275368 | 2/19 (11%) | ||
| COG5048 | 321..>621 | CDD:227381 | 68/200 (34%) | ||
| zf-C2H2 | 322..344 | CDD:278523 | 7/23 (30%) | ||
| C2H2 Zn finger | 324..344 | CDD:275368 | 6/21 (29%) | ||
| zf-H2C2_2 | 337..361 | CDD:290200 | 7/23 (30%) | ||
| C2H2 Zn finger | 352..373 | CDD:275368 | 9/20 (45%) | ||
| C2H2 Zn finger | 381..401 | CDD:275368 | 5/19 (26%) | ||
| zf-H2C2_2 | 394..415 | CDD:290200 | 9/20 (45%) | ||
| C2H2 Zn finger | 409..429 | CDD:275368 | 6/19 (32%) | ||
| zf-H2C2_2 | 422..446 | CDD:290200 | 10/23 (43%) | ||
| C2H2 Zn finger | 437..457 | CDD:275368 | 5/19 (26%) | ||
| C2H2 Zn finger | 467..485 | CDD:275368 | 9/17 (53%) | ||
| C2H2 Zn finger | 496..516 | CDD:275370 | 4/19 (21%) | ||
| C2H2 Zn finger | 524..544 | CDD:275368 | |||
| zf-H2C2_2 | 536..561 | CDD:290200 | |||
| C2H2 Zn finger | 552..573 | CDD:275368 | |||
| zf-C2H2 | 587..609 | CDD:278523 | |||
| C2H2 Zn finger | 589..609 | CDD:275368 | |||
| CG18262 | NP_572453.1 | C2H2 Zn finger | 224..246 | CDD:275368 | 6/21 (29%) |
| C2H2 Zn finger | 251..271 | CDD:275368 | 9/20 (45%) | ||
| COG5048 | <256..415 | CDD:227381 | 57/161 (35%) | ||
| zf-H2C2_2 | 263..288 | CDD:290200 | 11/25 (44%) | ||
| C2H2 Zn finger | 279..327 | CDD:275368 | 16/47 (34%) | ||
| zf-H2C2_2 | 320..342 | CDD:290200 | 9/21 (43%) | ||
| C2H2 Zn finger | 335..355 | CDD:275368 | 5/19 (26%) | ||
| C2H2 Zn finger | 363..383 | CDD:275368 | 10/20 (50%) | ||
| zf-C2H2 | 389..411 | CDD:278523 | 4/21 (19%) | ||
| C2H2 Zn finger | 391..411 | CDD:275368 | 4/19 (21%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | P | PTHR24390 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.100 | |||||