DRSC/TRiP Functional Genomics Resources

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Protein Alignment CTCF and ZBTB48

DIOPT Version :10

Sequence 1:NP_648109.1 Gene:CTCF / 38817 FlyBaseID:FBgn0035769 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_005332.1 Gene:ZBTB48 / 3104 HGNCID:4930 Length:688 Species:Homo sapiens


Alignment Length:548 Identity:140/548 - (25%)
Similarity:213/548 - (38%) Gaps:81/548 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 PKAI----SVRPARAAA-AKAKQSAMPPP-----------PA------------LVVKVPAPRG- 187
            |:|:    |.:|..:.. |...||.:.||           ||            ||.:...||| 
Human   105 PEAVELCQSFKPKTSVGQAAGGQSGLGPPASQNVNSHVKEPAGLEEEEVSRTLGLVPRDQEPRGS 169

  Fly   188 ----RPRKNPVIPKPEPMDLERELEELVDEPDISSMVTELSDYTVDEAAVEAATATLT--PNEAE 246
                ||:.:.......|..|..:|::.:....:.....|  |..|....:||..|.|.  .||.|
Human   170 HSPQRPQLHSPAQSEGPSSLCGKLKQALKPCPLEDKKPE--DCKVPPRPLEAEGAQLQGGSNEWE 232

  Fly   247 VYEFEDNATTEDENADKKDVDFVLSNKEVKLKTASSTSQNSNASGHKYSCPHCPYTASKKFLITR 311
            |.     ...||:.    |.|: :|..|..|     |.:.||..  :..|...|..::.......
Human   233 VV-----VQVEDDG----DGDY-MSEPEAVL-----TRRKSNVI--RKPCAAEPALSAGSLAAEP 280

  Fly   312 HSRSHDVEPSFKCSICERSFRSNVGLQNHINTHMGNKPHKCKLCESAFTTSGELVRH--TRYKHT 374
            ...........:|..|.:.|.|...|:.|...|.|.||.:|..|...:.....|:.|  ....:.
Human   281 AENRKGTAVPVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 345

  Fly   375 KEKPHKCTECTYASVELTKLRRHMTCHTGERPYQCPHCTYASQDMFKLKRHMV-IHTGEKKYQCD 438
            .|:...|:.|........:||.||..||||.||:|..|:........|:.||: :|...|.:.|.
Human   346 SEQVFTCSVCQETFRRRMELRVHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHGAPKPHACP 410

  Fly   439 ICKSRFTQSNSLKAHKLIHSVVDKPVFQCNYCPTTCGRKADLRVHIKHMHTSDVPMTCRRCGQQL 503
            .|...|.....|:.|:......:| :|.|..|......:..|::|||..|.::.|..|..|....
Human   411 TCAKCFLSRTELQLHEAFKHRGEK-LFVCEECGHRASSRNGLQMHIKAKHRNERPHVCEFCSHAF 474

  Fly   504 PDRYQYKLHVKSHEGEKCYSCKLCSYASVTQRHLASHMLIHLDEKPFHCDQCPQAFRQRQLLRRH 568
            ..:....:|:::|.|||.:.|.||.....||..|..|...|..|:||.|:.|.|.|.::..|.||
Human   475 TQKANLNMHLRTHTGEKPFQCHLCGKTFRTQASLDKHNRTHTGERPFSCEFCEQRFTEKGPLLRH 539

  Fly   569 MNLVHNE-----------EYQPPEP---REKLHK------CPSCPREFTHKGNLMRHMETHDDSA 613
            :...|.|           .::..|.   ..:.||      |..|..:||.:.:|.||||.||...
Human   540 VASRHQEGRPHFCQICGKTFKAVEQLRVHVRRHKGVRKFECTECGYKFTRQAHLRRHMEIHDRVE 604

  Fly   614 NAREKRRRLKLGRNVRLQKDGTVITLIK 641
            |...::|:|   ||:.::.:..|:..::
Human   605 NYNPRQRKL---RNLIIEDEKMVVVALQ 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTCFNP_648109.1 FAP 116..>202 CDD:429334 19/82 (23%)
C2H2 Zn finger 296..316 CDD:275368 2/19 (11%)
COG5048 321..>621 CDD:227381 91/322 (28%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
C2H2 Zn finger 352..373 CDD:275368 4/22 (18%)
C2H2 Zn finger 381..401 CDD:275368 6/19 (32%)
zf-H2C2_2 394..415 CDD:463886 12/20 (60%)
C2H2 Zn finger 409..429 CDD:275368 5/20 (25%)
zf-H2C2_2 422..446 CDD:463886 8/24 (33%)
C2H2 Zn finger 437..457 CDD:275368 5/19 (26%)
C2H2 Zn finger 467..485 CDD:275368 4/17 (24%)
C2H2 Zn finger 496..516 CDD:275370 3/19 (16%)
C2H2 Zn finger 524..544 CDD:275368 7/19 (37%)
zf-H2C2_2 536..561 CDD:463886 10/24 (42%)
C2H2 Zn finger 552..573 CDD:275368 7/20 (35%)
zf-C2H2 587..609 CDD:395048 11/27 (41%)
C2H2 Zn finger 589..609 CDD:275368 9/19 (47%)
ZBTB48NP_005332.1 BTB_POZ_ZBTB48_TZAP_KR3 8..115 CDD:349541 3/9 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 119..140 5/20 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..192 7/30 (23%)
C2H2 Zn finger 293..313 CDD:275368 6/19 (32%)
zf-H2C2_2 305..328 CDD:463886 8/22 (36%)
C2H2 Zn finger 321..372 CDD:275368 11/50 (22%)
SFP1 <374..459 CDD:227516 24/85 (28%)
C2H2 Zn finger 380..401 CDD:275368 5/20 (25%)
C2H2 Zn finger 409..425 CDD:275370 4/15 (27%)
C2H2 Zn finger 438..459 CDD:275368 6/20 (30%)
COG5048 <464..612 CDD:227381 43/147 (29%)
C2H2 Zn finger 467..487 CDD:275368 3/19 (16%)
C2H2 Zn finger 495..515 CDD:275368 7/19 (37%)
C2H2 Zn finger 523..540 CDD:275368 6/16 (38%)
C2H2 Zn finger 555..572 CDD:275368 1/16 (6%)
C2H2 Zn finger 580..600 CDD:275368 9/19 (47%)

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