Sequence 1: | NP_648109.1 | Gene: | CTCF / 38817 | FlyBaseID: | FBgn0035769 | Length: | 818 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017456046.1 | Gene: | Zfp438 / 307024 | RGDID: | 1307214 | Length: | 800 | Species: | Rattus norvegicus |
Alignment Length: | 625 | Identity: | 124/625 - (19%) |
---|---|---|---|
Similarity: | 217/625 - (34%) | Gaps: | 165/625 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 93 CYIKTTPKKQKELQKKLKQAAAKPGKATRSVVSTATNKSINLRPAKS-------TPKATTSKPPP 150
Fly 151 EPKAISVRPARAAAAKAKQSAMPPPPALVVKVPAPRGRPRKNPVIPKPEPMDLERELEELVDEPD 215
Fly 216 --ISSMVTELSDYTVDEAAVEAATATLTPNEAEVYEFEDNATTEDE----NADKK-------DVD 267
Fly 268 FVLSNK--------------------EVKLKTASSTSQNSNASGHKYSCPH---CPYTASKKFLI 309
Fly 310 ------TRHSRSHDVEP-SFKCSICERSFRSNV-------------------------GL-QNHI 341
Fly 342 NTHMGNKPHKCKLCESAFTTSGELVRHTRYKHTKEKPHKCTECTYASVELTKLRRHMTCHTGERP 406
Fly 407 -YQCPHCTYASQDMFKLKRHMVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVVDKP--VFQCN 468
Fly 469 YCPTTCGRKADLRV---HIKHMHTSDVPMTCRRCGQQLPDRYQYKLHVKSHEGEKCYSCKLCSYA 530
Fly 531 SVTQRHLASHMLIHLDEK---PFHCDQC---PQAFRQRQLLRRHMNLVHNEEY--------QPPE 581
Fly 582 PREKLHKCPSCPREFTHKGNLMRHMETHDDS-ANAREKRR 620 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CTCF | NP_648109.1 | 23ISL | <116..206 | CDD:293226 | 24/96 (25%) |
C2H2 Zn finger | 296..316 | CDD:275368 | 3/28 (11%) | ||
COG5048 | 321..>621 | CDD:227381 | 68/347 (20%) | ||
zf-C2H2 | 322..344 | CDD:278523 | 8/47 (17%) | ||
C2H2 Zn finger | 324..344 | CDD:275368 | 7/45 (16%) | ||
zf-H2C2_2 | 337..361 | CDD:290200 | 6/24 (25%) | ||
C2H2 Zn finger | 352..373 | CDD:275368 | 1/20 (5%) | ||
C2H2 Zn finger | 381..401 | CDD:275368 | 0/19 (0%) | ||
zf-H2C2_2 | 394..415 | CDD:290200 | 4/21 (19%) | ||
C2H2 Zn finger | 409..429 | CDD:275368 | 8/19 (42%) | ||
zf-H2C2_2 | 422..446 | CDD:290200 | 9/23 (39%) | ||
C2H2 Zn finger | 437..457 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 467..485 | CDD:275368 | 6/20 (30%) | ||
C2H2 Zn finger | 496..516 | CDD:275370 | 3/19 (16%) | ||
C2H2 Zn finger | 524..544 | CDD:275368 | 4/19 (21%) | ||
zf-H2C2_2 | 536..561 | CDD:290200 | 6/30 (20%) | ||
C2H2 Zn finger | 552..573 | CDD:275368 | 5/23 (22%) | ||
zf-C2H2 | 587..609 | CDD:278523 | 2/21 (10%) | ||
C2H2 Zn finger | 589..609 | CDD:275368 | 1/19 (5%) | ||
Zfp438 | XP_017456046.1 | C2H2 Zn finger | 497..517 | CDD:275368 | 8/19 (42%) |
zf-H2C2_2 | 509..534 | CDD:290200 | 9/24 (38%) | ||
C2H2 Zn finger | 525..545 | CDD:275368 | 7/19 (37%) | ||
C2H2 Zn finger | 557..575 | CDD:275368 | 6/20 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24390 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.100 |