Sequence 1: | NP_648109.1 | Gene: | CTCF / 38817 | FlyBaseID: | FBgn0035769 | Length: | 818 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_937891.1 | Gene: | Zbtb40 / 230848 | MGIID: | 2682254 | Length: | 1258 | Species: | Mus musculus |
Alignment Length: | 709 | Identity: | 151/709 - (21%) |
---|---|---|---|
Similarity: | 246/709 - (34%) | Gaps: | 159/709 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 LNNFHKEIEGNSDEKVVNTILEAISAEAIDLDENGAE---------AGGSKPMEEAEADLDHAEE 73
Fly 74 AEEEEEDDEDKYFIDDEGNCYIKTTPKKQKELQKKLKQAAAKPGKATRSVVSTATNKSINLRPAK 138
Fly 139 STPKATTSKPPPEPKAISVRPARAAAAKAKQSAMPPPPALVVKVPAPRGRPRKNPV--IPKPEPM 201
Fly 202 DLERELEELVDEPDISSMVTELSDYTVDEAAVEAATATLTPNEAEVYEFEDNATTEDENADKKDV 266
Fly 267 DFVLSNKEVKLKTASSTSQNSNASGHKYSCPHCPYTASKKFLITRHS-RSHDVEPSFKCSICERS 330
Fly 331 FRSNVGLQNHINTHMGNKPHKCKLCESAFTTSGELVRHTRYKHTK-EKPHKCTECTYASVELTKL 394
Fly 395 RRHMTCHTGERPYQCPHC--TYASQDMFKLKRHMVIHTGEKKYQCDICKSRFTQSNSLKAHKLIH 457
Fly 458 SVVDKPVF-------------QCNYCPTTCGRKADLRVHIKHMHTSDVPMTCRRCGQQLPDRYQY 509
Fly 510 KLHVKSHEGEKCYSCKLCSYASVTQRHLASHMLIHLDEKPFHCDQCPQAFRQRQLLRRHMNLVHN 574
Fly 575 EEYQPPEPREKLHKCPSCPREFTHKGNLMRHMET-HDDSANAREKRRRLKLGRNVRLQKDGT--- 635
Fly 636 -VITLIKDQ------YVDM-DRDQEENEEDDNPESYDLAEIEPENSEAEDADDDVETIV 686 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CTCF | NP_648109.1 | 23ISL | <116..206 | CDD:293226 | 17/91 (19%) |
C2H2 Zn finger | 296..316 | CDD:275368 | 5/20 (25%) | ||
COG5048 | 321..>621 | CDD:227381 | 81/316 (26%) | ||
zf-C2H2 | 322..344 | CDD:278523 | 5/21 (24%) | ||
C2H2 Zn finger | 324..344 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 337..361 | CDD:290200 | 10/23 (43%) | ||
C2H2 Zn finger | 352..373 | CDD:275368 | 5/20 (25%) | ||
C2H2 Zn finger | 381..401 | CDD:275368 | 5/19 (26%) | ||
zf-H2C2_2 | 394..415 | CDD:290200 | 5/22 (23%) | ||
C2H2 Zn finger | 409..429 | CDD:275368 | 9/21 (43%) | ||
zf-H2C2_2 | 422..446 | CDD:290200 | 11/23 (48%) | ||
C2H2 Zn finger | 437..457 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 467..485 | CDD:275368 | 4/17 (24%) | ||
C2H2 Zn finger | 496..516 | CDD:275370 | 6/19 (32%) | ||
C2H2 Zn finger | 524..544 | CDD:275368 | 1/19 (5%) | ||
zf-H2C2_2 | 536..561 | CDD:290200 | 6/24 (25%) | ||
C2H2 Zn finger | 552..573 | CDD:275368 | 6/20 (30%) | ||
zf-C2H2 | 587..609 | CDD:278523 | 7/22 (32%) | ||
C2H2 Zn finger | 589..609 | CDD:275368 | 7/20 (35%) | ||
Zbtb40 | NP_937891.1 | BTB | 19..113 | CDD:279045 | |
BTB | 25..113 | CDD:197585 | |||
C2H2 Zn finger | 827..848 | CDD:275368 | 4/20 (20%) | ||
C2H2 Zn finger | 856..876 | CDD:275368 | 4/20 (20%) | ||
zf-H2C2_2 | 869..893 | CDD:290200 | 8/34 (24%) | ||
COG5048 | <872..1078 | CDD:227381 | 57/220 (26%) | ||
C2H2 Zn finger | 884..933 | CDD:275368 | 11/48 (23%) | ||
zf-H2C2_2 | 925..950 | CDD:290200 | 10/24 (42%) | ||
C2H2 Zn finger | 941..960 | CDD:275368 | 5/18 (28%) | ||
C2H2 Zn finger | 971..989 | CDD:275370 | 5/17 (29%) | ||
zf-C2H2 | 997..1019 | CDD:278523 | 9/23 (39%) | ||
C2H2 Zn finger | 1027..1047 | CDD:275368 | 6/19 (32%) | ||
C2H2 Zn finger | 1067..1086 | CDD:275368 | 5/18 (28%) | ||
C2H2 Zn finger | 1096..1117 | CDD:275368 | 7/47 (15%) | ||
C2H2 Zn finger | 1125..1144 | CDD:275368 | 6/18 (33%) | ||
C2H2 Zn finger | 1156..1173 | CDD:275368 | 5/16 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
0 | 0.000 |