DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CTCF and Zfp51

DIOPT Version :9

Sequence 1:NP_648109.1 Gene:CTCF / 38817 FlyBaseID:FBgn0035769 Length:818 Species:Drosophila melanogaster
Sequence 2:NP_001295252.1 Gene:Zfp51 / 22709 MGIID:99198 Length:781 Species:Mus musculus


Alignment Length:513 Identity:152/513 - (29%)
Similarity:218/513 - (42%) Gaps:131/513 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 ELEELVDEPDISSMVTELSDYTVDEAAVEAATATLTPNEAEVYEFEDNAT------TEDENADKK 264
            :|.|::.||...::... ||.|      ||:......|..:|.....|..      |.:|..:.|
Mouse   106 KLGEMLHEPSNCALYNR-SDTT------EASNKFRCCNNEDVSVDSSNQNRYKSTHTGEEPCESK 163

  Fly   265 DVDFVLSNKEVKLKTASSTSQNS---NASGHK-----------YS-----------------CPH 298
            |.       |..|...|..||:.   ||..|:           ||                 |..
Mouse   164 DC-------EKSLTLCSDISQDQRLYNAKQHRQEVYDDYFSSAYSLMQPTAYIKEKPHQCGKCGK 221

  Fly   299 CPYTASKKFLITRHSRSHDVEPSFKCSICERSFRSNVGLQNHINTHMGNKPHKCKLCESAFTTSG 363
            |..|:|.   :|.|.|.|..|..:|||:|::||.....|:.|...|.|.||:|||.||.:|....
Mouse   222 CFNTSSS---LTVHHRIHTKEKPYKCSVCDKSFTQCTHLKIHQRRHTGEKPYKCKECEKSFVQLS 283

  Fly   364 ELVRHTRYKHTKEKPHKCTEC-----------TYASV-----------------ELTKLRRHMTC 400
            .|..|.:. ||.|||:||.||           |:..:                 :|:.||:|...
Mouse   284 ALKSHQKL-HTGEKPYKCKECDKSFAHYPNFRTHQKIHTSEEHCSCPECGREFHQLSHLRKHYRL 347

  Fly   401 HTGERPYQCPHCT-----YASQ-----------------------DMFKLKRHMVIHTGEKKYQC 437
            ||||:||:|..|.     |||.                       ::..||||..||||||.|:|
Mouse   348 HTGEKPYKCNECDRSFTHYASLRWHQKTHTPEIHYECKECGKSFIELSHLKRHYRIHTGEKPYKC 412

  Fly   438 DICKSRFTQSNSLKAHKLIHSVVDKPVFQCNYCPTTCGRKADLRVHIKHMHTSDVPMTCRRCGQQ 502
            :||...||.:.:||.|:.||: .:|| ::|..|..:....:.||.| :::||.:.|..|:.|.:.
Mouse   413 EICDKSFTTTTTLKTHQKIHT-GEKP-YKCRECDKSFIHSSHLRRH-QNVHTGERPYRCKECDKS 474

  Fly   503 LPDRYQYKLHVKSHEGEKCYSCKLCSYASVTQR-HLAS-HMLIHLDEKPFHCDQCPQAFRQRQLL 565
            ..:....:.|.|||.|||.|.|:.|. .|.||| :|.: |..:|..|:|:.|.:|.::|.....|
Mouse   475 FHESATLREHEKSHTGEKTYKCRECD-KSFTQRAYLRNHHNRVHTGERPYECKECGKSFTTCSTL 538

  Fly   566 RRHMNLVHNEEYQPPEPREKLHKCPSCPREFTHKGNLMRHMETHDDSANAREKRRRLK 623
            |.|.. :|.        .:|.:||..|.:.||:...|..|.:.|     :.||..|.|
Mouse   539 RIHQT-IHT--------GKKPYKCIECGKSFTNNSYLRTHQKVH-----SGEKPYRCK 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CTCFNP_648109.1 23ISL <116..206 CDD:293226 152/513 (30%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
COG5048 321..>621 CDD:227381 115/357 (32%)
zf-C2H2 322..344 CDD:278523 8/21 (38%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
zf-H2C2_2 337..361 CDD:290200 12/23 (52%)
C2H2 Zn finger 352..373 CDD:275368 7/20 (35%)
C2H2 Zn finger 381..401 CDD:275368 8/47 (17%)
zf-H2C2_2 394..415 CDD:290200 11/25 (44%)
C2H2 Zn finger 409..429 CDD:275368 9/47 (19%)
zf-H2C2_2 422..446 CDD:290200 15/23 (65%)
C2H2 Zn finger 437..457 CDD:275368 8/19 (42%)
C2H2 Zn finger 467..485 CDD:275368 5/17 (29%)
C2H2 Zn finger 496..516 CDD:275370 4/19 (21%)
C2H2 Zn finger 524..544 CDD:275368 8/21 (38%)
zf-H2C2_2 536..561 CDD:290200 8/25 (32%)
C2H2 Zn finger 552..573 CDD:275368 6/20 (30%)
zf-C2H2 587..609 CDD:278523 7/21 (33%)
C2H2 Zn finger 589..609 CDD:275368 6/19 (32%)
Zfp51NP_001295252.1 KRAB 42..82 CDD:366587
C2H2 Zn finger 216..236 CDD:275368 7/22 (32%)
SFP1 <239..318 CDD:227516 31/79 (39%)
C2H2 Zn finger 244..264 CDD:275368 7/19 (37%)
C2H2 Zn finger 272..292 CDD:275368 7/20 (35%)
C2H2 Zn finger 300..320 CDD:275368 4/19 (21%)
COG5048 327..749 CDD:227381 87/274 (32%)
C2H2 Zn finger 356..376 CDD:275368 5/19 (26%)
C2H2 Zn finger 384..404 CDD:275368 4/19 (21%)
C2H2 Zn finger 412..432 CDD:275368 8/19 (42%)
C2H2 Zn finger 440..460 CDD:275368 5/20 (25%)
C2H2 Zn finger 468..488 CDD:275368 4/19 (21%)
C2H2 Zn finger 496..517 CDD:275368 8/21 (38%)
C2H2 Zn finger 525..545 CDD:275368 6/20 (30%)
C2H2 Zn finger 553..573 CDD:275368 6/19 (32%)
C2H2 Zn finger 581..601 CDD:275368 1/2 (50%)
C2H2 Zn finger 609..629 CDD:275368
C2H2 Zn finger 637..657 CDD:275368
C2H2 Zn finger 665..685 CDD:275368
C2H2 Zn finger 693..713 CDD:275368
C2H2 Zn finger 721..741 CDD:275368
C2H2 Zn finger 749..769 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.