| Sequence 1: | NP_648109.1 | Gene: | CTCF / 38817 | FlyBaseID: | FBgn0035769 | Length: | 818 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_491744.3 | Gene: | let-391 / 182953 | WormBaseID: | WBGene00006492 | Length: | 453 | Species: | Caenorhabditis elegans |
| Alignment Length: | 508 | Identity: | 98/508 - (19%) |
|---|---|---|---|
| Similarity: | 167/508 - (32%) | Gaps: | 163/508 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 277 LKTASSTSQNSNASGHKYSCPHCPYTASKKFLITRHSRSHDV----EPSFK-------------C 324
Fly 325 SICERSFRSNVGLQNHINTHMGNKPHKCKLCESAFTTSGELVRHTRYKHTKEKPHKCT-ECTYAS 388
Fly 389 VELTKLRRHMTCHTG------ERPY-------QCPHCTYASQDMFKLKRHMVIH-----TGEKKY 435
Fly 436 QCD-----ICKSRFTQSN--------------------SLKAHKLIHSV-------------VDK 462
Fly 463 P----------------VFQCNYCPTTCGRKADLRVHIKHMHTSDVPMTCRRCGQQLPDRYQYKL 511
Fly 512 HV-KSHEGEKCYSCK-LCSYASVTQRHLASH-MLIHLDEKPFHC--DQCPQAFRQRQLLRRHMNL 571
Fly 572 VHNEEYQPPEPREKLHKCPSCPREFTHKGNLMRHME-THDDSANAREKRRRLKLGRNVRLQKDGT 635
Fly 636 VITLIKDQYVDMDRDQEENEE-----DDNPESYDLAEIEPENSEAEDADDDVE 683 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CTCF | NP_648109.1 | 23ISL | <116..206 | CDD:293226 | |
| C2H2 Zn finger | 296..316 | CDD:275368 | 4/19 (21%) | ||
| COG5048 | 321..>621 | CDD:227381 | 80/391 (20%) | ||
| zf-C2H2 | 322..344 | CDD:278523 | 3/34 (9%) | ||
| C2H2 Zn finger | 324..344 | CDD:275368 | 3/19 (16%) | ||
| zf-H2C2_2 | 337..361 | CDD:290200 | 9/23 (39%) | ||
| C2H2 Zn finger | 352..373 | CDD:275368 | 6/20 (30%) | ||
| C2H2 Zn finger | 381..401 | CDD:275368 | 4/20 (20%) | ||
| zf-H2C2_2 | 394..415 | CDD:290200 | 8/33 (24%) | ||
| C2H2 Zn finger | 409..429 | CDD:275368 | 6/19 (32%) | ||
| zf-H2C2_2 | 422..446 | CDD:290200 | 6/33 (18%) | ||
| C2H2 Zn finger | 437..457 | CDD:275368 | 5/44 (11%) | ||
| C2H2 Zn finger | 467..485 | CDD:275368 | 4/17 (24%) | ||
| C2H2 Zn finger | 496..516 | CDD:275370 | 6/20 (30%) | ||
| C2H2 Zn finger | 524..544 | CDD:275368 | 6/21 (29%) | ||
| zf-H2C2_2 | 536..561 | CDD:290200 | 7/27 (26%) | ||
| C2H2 Zn finger | 552..573 | CDD:275368 | 7/22 (32%) | ||
| zf-C2H2 | 587..609 | CDD:278523 | 1/22 (5%) | ||
| C2H2 Zn finger | 589..609 | CDD:275368 | 1/20 (5%) | ||
| let-391 | NP_491744.3 | C2H2 Zn finger | 59..79 | CDD:275368 | 3/19 (16%) |
| zf-H2C2_2 | 73..96 | CDD:290200 | 9/22 (41%) | ||
| C2H2 Zn finger | 87..108 | CDD:275368 | 6/20 (30%) | ||
| C2H2 Zn finger | 116..137 | CDD:275368 | 4/20 (20%) | ||
| C2H2 Zn finger | 270..290 | CDD:275368 | 5/20 (25%) | ||
| zf-H2C2_2 | 286..304 | CDD:290200 | 8/18 (44%) | ||
| C2H2 Zn finger | 298..319 | CDD:275368 | 6/20 (30%) | ||
| C2H2 Zn finger | 327..347 | CDD:275368 | 5/19 (26%) | ||
| C2H2 Zn finger | 357..377 | CDD:275368 | 7/19 (37%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 0 | 0.000 | |||||