DRSC/TRiP Functional Genomics Resources

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Protein Alignment qm and ispA

DIOPT Version :10

Sequence 1:NP_523958.2 Gene:qm / 38816 FlyBaseID:FBgn0019662 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_414955.1 Gene:ispA / 945064 ECOCYCID:EG10508 Length:299 Species:Escherichia coli


Alignment Length:276 Identity:64/276 - (23%)
Similarity:113/276 - (40%) Gaps:36/276 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQMLHNSSLLIDDIE--DNS 82
            |:..:::...|...:.||:.|..|..|..|...:....|......|:.:|..||:.||:.  |:.
E. coli    28 QNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDD 92

  Fly    83 ILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEAT-KVYTEQLLELHR---------G 137
            .||||:|..|..:|.|:.|.|.:....||...:...|.||.: :.....:.||..         |
E. coli    93 DLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGG 157

  Fly   138 QGMEIYWRDSFTCPSESDYKLMTV--------RKTGGLFMLAIRLMQLFSSNK-----EDYSKLT 189
            |.:::          :::.|.:.:        .|||.|...|:||..|.:.:|     ....|..
E. coli   158 QALDL----------DAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYA 212

  Fly   190 AILGLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAV-RTQKQDKQVLHILRQRTHDI 253
            ..:||.||::||..::.....|..|....|...||..:|.:..: :.:|:.:.::...||....:
E. coli   213 ESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQL 277

  Fly   254 EVKKYCITLLEKLGSF 269
            ..:....:.||.|..:
E. coli   278 AEQSLDTSALEALADY 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qmNP_523958.2 polyprenyl_synt 21..262 CDD:459773 60/266 (23%)
ispANP_414955.1 PRK10581 1..299 CDD:182567 64/276 (23%)

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