DRSC/TRiP Functional Genomics Resources

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Protein Alignment qm and GGR

DIOPT Version :10

Sequence 1:NP_523958.2 Gene:qm / 38816 FlyBaseID:FBgn0019662 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_195558.1 Gene:GGR / 830002 AraportID:AT4G38460 Length:326 Species:Arabidopsis thaliana


Alignment Length:205 Identity:52/205 - (25%)
Similarity:80/205 - (39%) Gaps:51/205 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LIPGEKLAQI--GDIVQMLHNSSLLIDDIE--DNSILRRGVPVAHSIYGVASTINAANYALF-LA 111
            |..|::||..  ...::|:|.:||:.||:.  |:..:|||.|..|::||....|.|.: ||| ||
plant   101 LFGGDRLAAFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGD-ALFPLA 164

  Fly   112 LEKVQQLDH------PEATKVYTEQLLELHRGQGMEIYWRDSFTCPSESDYKLMTVRKTGGLFML 170
            .:.:  :.|      |.||  ....:.|:.|..|.        |..:...|    |...||.|.|
plant   165 FQHI--VSHTPPDLVPRAT--ILRLITEIARTVGS--------TGMAAGQY----VDLEGGPFPL 213

  Fly   171 AIRLMQLFSSNKEDYSKLTAIL------------------GLYFQIRDDYCNLSLKEYTEN---- 213
            :....:.|.:..|..:....:|                  |:.:|:.||......|.|...    
plant   214 SFVQEKKFGAMGECSAVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKG 278

  Fly   214 -KSFAEDLTE 222
             ...||:|.|
plant   279 MMEMAEELKE 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qmNP_523958.2 polyprenyl_synt 21..262 CDD:459773 52/205 (25%)
GGRNP_195558.1 IspA 46..>263 CDD:439912 45/178 (25%)

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