DRSC/TRiP Functional Genomics Resources

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Protein Alignment qm and GPS1

DIOPT Version :10

Sequence 1:NP_523958.2 Gene:qm / 38816 FlyBaseID:FBgn0019662 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001031483.1 Gene:GPS1 / 818028 AraportID:AT2G34630 Length:422 Species:Arabidopsis thaliana


Alignment Length:359 Identity:77/359 - (21%)
Similarity:150/359 - (41%) Gaps:59/359 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EELNIILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSE----LALAFNHWLLIP----GE-- 56
            :||:::..|.::....:.........:.:.:.:.||||||.    :|.|.|  :.:|    ||  
plant    90 DELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQGKQFRSTILLLMATALN--VRVPEALIGEST 152

  Fly    57 -------KLAQ--IGDIVQMLHNSSLLIDDIEDNSILRRGVPVAHSIYGVASTINAANYALFLAL 112
                   ::.|  |.:|.:|:|.:|||.||:.|::..||||...:.:.|...::.|.::.|..|.
plant   153 DIVTSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKMSVLAGDFLLSRAC 217

  Fly   113 EKVQQLDHPEATKVYTEQLLELHRGQGMEIYWRDSFTCPSESDYKL-----MTVRKTGGLFMLAI 172
            ..:..|.:.|...:....:..|..|:.|||      |..:|..|.:     .|..||..|...:.
plant   218 GALAALKNTEVVALLATAVEHLVTGETMEI------TSSTEQRYSMDYYMQKTYYKTASLISNSC 276

  Fly   173 RLMQLFSSNKEDYSKLT----AILGLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAV 233
            :.:.:.:....:.:.|.    ..|||.||:.||..:.:....:..|....|:..|....|::.|:
plant   277 KAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAM 341

  Fly   234 RTQKQDKQVLHILRQRTHDIEVKKYCITLLEKLGSFQYTRKVLESLDAEARSEVARLGSNPYMDR 298
            ....|.::|:..:.:...::::      .||.||..:..::..|.....|....|.:||.|    
plant   342 EEFPQLREVVDQVEKDPRNVDI------ALEYLGKSKGIQRARELAMEHANLAAAAIGSLP---- 396

  Fly   299 LLNKLLSWKTSDSASITQSNQ----INHNNVSRS 328
                     .:|:..:.:|.:    :.|..::|:
plant   397 ---------ETDNEDVKRSRRALIDLTHRVITRN 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qmNP_523958.2 polyprenyl_synt 21..262 CDD:459773 60/268 (22%)
GPS1NP_001031483.1 PLN02890 1..422 CDD:178478 77/359 (21%)

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