DRSC/TRiP Functional Genomics Resources

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Protein Alignment qm and PDSS2

DIOPT Version :10

Sequence 1:NP_523958.2 Gene:qm / 38816 FlyBaseID:FBgn0019662 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_011534258.1 Gene:PDSS2 / 57107 HGNCID:23041 Length:465 Species:Homo sapiens


Alignment Length:312 Identity:61/312 - (19%)
Similarity:105/312 - (33%) Gaps:100/312 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 HWLLIPGEKLAQIGDIVQMLHNSSLLIDDIEDNSI-LRRGVPVAHSIYGVA-------------- 98
            ||..:..|....:|.....:....||.|::.:.:: :|:.|...|.:...|              
Human    48 HWNQVVSEAEKIVGYPTSFMSLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSWNSLQLR 112

  Fly    99 -------------STINAA--NYALFLALEKVQQLDHPEATKVYTEQLLELHRGQGMEIYWRDSF 148
                         |::|.:  ||.:...:...|: ...|.|::....|| :|||           
Human   113 GLVVLLISKAAGPSSVNTSCQNYDMVSGIYSCQR-SLAEITELIHIALL-VHRG----------- 164

  Fly   149 TCPSESDYKLMTVRKTGGLFMLAIRLMQLFSSN---KE-DYSKLTAILGLYFQIRDDYCNLSLKE 209
                                  .:.|.:|.||:   |: .:....|||...|.:.:....|:|.:
Human   165 ----------------------IVNLNELQSSDGPLKDMQFGNKIAILSGDFLLANACNGLALLQ 207

  Fly   210 YTE----NKSFAEDLTEGKFGFPVIHAVRTQKQ----DKQVLHILRQRT---HDIEVKKYCITLL 263
            .|:    ..|...||.:|     |.|...|.|:    |...:...:::|   |...:.|.|...:
Human   208 NTKVVELLASALMDLVQG-----VYHENSTSKESYITDDIGISTWKEQTFLSHGALLAKSCQAAM 267

  Fly   264 EKLGSFQYTRKVLESLDAEARSEVARLGSNPYMDRLLNK----LLSWKTSDS 311
            |           |...|||.::...:.|.:..|...:|.    .:..|||||
Human   268 E-----------LAKHDAEVQNMAFQYGKHMAMSHKINSDVQPFIKEKTSDS 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qmNP_523958.2 polyprenyl_synt 21..262 CDD:459773 48/257 (19%)
PDSS2XP_011534258.1 Isoprenoid_Biosyn_C1 68..465 CDD:469660 57/292 (20%)

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