DRSC/TRiP Functional Genomics Resources

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Protein Alignment qm and Pdss1

DIOPT Version :10

Sequence 1:NP_523958.2 Gene:qm / 38816 FlyBaseID:FBgn0019662 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_062374.2 Gene:Pdss1 / 56075 MGIID:1889278 Length:409 Species:Mus musculus


Alignment Length:327 Identity:66/327 - (20%)
Similarity:131/327 - (40%) Gaps:42/327 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EELNIILQKTKDKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQ------ 60
            :||:|..::.||.|             .|.....||.||..:.:.......|......:      
Mouse   106 KELHISTRELKDMS-------------EYYFDGKGKAFRPIIVVLMARACNIHHNNAREMQASQR 157

  Fly    61 -IGDIVQMLHNSSLLIDDIEDNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEAT 124
             |..:.:|:|.::|:.||:.|::..|||....:.|:|....:.|.:..|..|...:.::.:....
Mouse   158 SIALVAEMIHTATLVHDDVIDDASSRRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVV 222

  Fly   125 KVYTEQLLELHRGQGMEIYWRDSFTCPSESD----YKLMTVRKTGGLFMLAIRLMQLFSSNKE-- 183
            .:..:.:.:|.||:.:::..::     :|::    |...|.:||..|...:.:.:.:......  
Mouse   223 SMLAQVIEDLVRGEFLQLGSKE-----NENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVV 282

  Fly   184 -----DYSKLTAILGLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVRTQKQDKQVL 243
                 .|.|   .:|:.||:.||..:.:.......|..:.||..|....||:.|  .|:..:...
Mouse   283 HEIAYQYGK---NVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFA--CQQFPEMNA 342

  Fly   244 HILRQRTHDIEVKKYCITLLEKLGSFQYTRKVLESLDAEARSEVARLGSNPYMDRLLNKLLSWKT 308
            .|:|:.:...:|.:....:|:..| .|.|..:.:....:|..|:.:|..:...|.|:....|..|
Mouse   343 MIMRRFSLPGDVDRARQYVLQSDG-VQQTTYLAQQYCHKAVREIRKLRPSTERDALIQLSESVLT 406

  Fly   309 SD 310
            .|
Mouse   407 RD 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qmNP_523958.2 polyprenyl_synt 21..262 CDD:459773 48/258 (19%)
Pdss1NP_062374.2 PLN02890 57..409 CDD:178478 66/327 (20%)

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