DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment qm and qless

DIOPT Version :9

Sequence 1:NP_001163370.1 Gene:qm / 38816 FlyBaseID:FBgn0019662 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001287619.1 Gene:qless / 43697 FlyBaseID:FBgn0051005 Length:436 Species:Drosophila melanogaster


Alignment Length:315 Identity:76/315 - (24%)
Similarity:139/315 - (44%) Gaps:35/315 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KDKSTQKEQDEILLQPFTYIQQIPGKQFRSE----LALAFNHWLLIPGEKLA----QIGDIVQML 68
            |..::|.|.|.|.    :|.....||..|..    :|.|.|:.|.....:|.    ||....:|:
  Fly   133 KSGTSQPELDTIA----SYYFDGQGKALRPMVTMLMAKAINYHLNNESHQLVHKQRQIALFSEMV 193

  Fly    69 HNSSLLIDDIEDNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEATKVYTEQLLE 133
            |::||:.||:.|.|..|||.|..::::.......|.:|.|.:|...:.:|...:.|.|.::.|.:
  Fly   194 HSASLVHDDVIDQSDFRRGKPSVNALWNHKKVTMAGDYILSIASIMIARLRSDDVTIVLSQILTD 258

  Fly   134 LHRGQGMEIYWRDSFTCPSESD----YKLMTVRKTGGLFMLAIRLMQLFSSNKEDYSKLT----A 190
            |.:|:.|::..|:     :|::    |...|.|||..|...|::...:.:...::.:::.    .
  Fly   259 LVQGEFMQLGSRE-----TENERFAHYLTKTYRKTASLIANALKATAVIAQADDNVAEVAFQYGR 318

  Fly   191 ILGLYFQIRDDYCNLSLKEYTENKSFAEDLTEGKFGFPVIHAVRTQKQDKQVLHILRQRTHDIEV 255
            .:||.||:.||..:.........|..|.||..|....||:.|  .:|..:....::|:.:...:|
  Fly   319 NIGLAFQLVDDMLDFVSSTEQMGKPTAADLKLGLATAPVLFA--CEKYPELNPMVMRRFSEPGDV 381

  Fly   256 KKYCITLLEKLGSFQYTRKVLESLDAEARSEVARLGSNPYM-------DRLLNKL 303
            :: ...|:.|....:.||.:.:....||......|..:||.       |.::|::
  Fly   382 ER-AFELVHKSHGLEQTRFLAKKHCNEAIRLAQELTESPYQKGLQVVADLVINRM 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qmNP_001163370.1 polyprenyl_synt 30..267 CDD:278763 62/252 (25%)
qlessNP_001287619.1 Isoprenoid_Biosyn_C1 117..435 CDD:294142 76/313 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469588
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0142
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12001
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.