DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment qm and ggps1

DIOPT Version :10

Sequence 1:NP_523958.2 Gene:qm / 38816 FlyBaseID:FBgn0019662 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001278689.2 Gene:ggps1 / 336798 ZFINID:ZDB-GENE-030131-8742 Length:309 Species:Danio rerio


Alignment Length:307 Identity:172/307 - (56%)
Similarity:229/307 - (74%) Gaps:2/307 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DKSTQKEQDEILLQPFTYIQQIPGKQFRSELALAFNHWLLIPGEKLAQIGDIVQMLHNSSLLIDD 77
            |:..:...:.|||:|:.|:.|:||||.|::|:.||||||.:|.:||..|.::.:||||:||||||
Zfish     2 DEKQRATSERILLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKLQVIIEVTEMLHNASLLIDD 66

  Fly    78 IEDNSILRRGVPVAHSIYGVASTINAANYALFLALEKVQQLDHPEATKVYTEQLLELHRGQGMEI 142
            |||:|.||||.||||||||:.|.||:|||..||.||||..|:||||.:|:|.||||||||||::|
Zfish    67 IEDSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLMLEHPEAVRVFTRQLLELHRGQGLDI 131

  Fly   143 YWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFSSNKEDYSKLTAILGLYFQIRDDYCNLSL 207
            :|||::|||||::|:.|.::||||||.||:.||||||..|.|...|...|||||||||||.||:.
Zfish   132 HWRDTYTCPSEAEYRAMVLQKTGGLFGLAVGLMQLFSDWKRDLKPLLDTLGLYFQIRDDYANLNS 196

  Fly   208 KEYTENKSFAEDLTEGKFGFPVIHAVRTQKQDKQVLHILRQRTHDIEVKKYCITLLEKLGSFQYT 272
            |||:.||||.||||||||.||.|||:.:..:..||.:||||||.::::|:||:..|||:|||.||
Zfish   197 KEYSANKSFCEDLTEGKFSFPTIHAIWSHPESTQVQNILRQRTENLDIKRYCVDYLEKVGSFAYT 261

  Fly   273 RKVLESLDAEARSEVARLGSNPYMDRLLNKL--LSWKTSDSASITQS 317
            |:.|..|:.||...:..||.||.::.|:..|  :..:....|:::||
Zfish   262 RQTLLDLEVEAYRLIKELGGNPELEALVEHLSRMYKEPEGGATVSQS 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qmNP_523958.2 polyprenyl_synt 21..262 CDD:459773 149/240 (62%)
ggps1NP_001278689.2 None

Return to query results.
Submit another query.