DRSC/TRiP Functional Genomics Resources

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Protein Alignment qm and fdps-1

DIOPT Version :10

Sequence 1:NP_523958.2 Gene:qm / 38816 FlyBaseID:FBgn0019662 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_493027.1 Gene:fdps-1 / 173075 WormBaseID:WBGene00011058 Length:352 Species:Caenorhabditis elegans


Alignment Length:279 Identity:64/279 - (22%)
Similarity:113/279 - (40%) Gaps:54/279 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 DIVQMLHNSSLLIDDIEDNSILRRGVPVAHSIYGVA-STINAANYALFLALEKVQQLDHPEATKV 126
            :|:|..:   |:.|||.|||..|||.|......||. |.||.| :.:...:|.:.:|..|  ..|
 Worm    89 EIIQSFY---LIADDIMDNSETRRGKPCWFRREGVGMSAINDA-FIMDSFVEDILRLALP--GHV 147

  Fly   127 YTEQLLELHR--------GQGME---IYWRDSFTCPSESDYKLMTVRKTGGLFMLAIRLMQLFSS 180
            ..::|.|.:|        ||.::   :....|||.   ..|:||...||....:.....|.|..|
 Worm   148 NLDRLCEAYRKSKQKTLIGQFLDTSSVNQISSFTW---DRYELMVENKTSHYTVFHPIQMALIIS 209

  Fly   181 NKEDY----SKLTAILGLYFQIRDDYCNLSLKEYTENK---SFAEDLTEGKFGFPVIHAVR---- 234
            :...|    .|:...:|..||.:||:    |..|.:.|   ....|:.:||..:..:.|::    
 Worm   210 DVLAYHGSVKKVAYQIGFLFQSQDDF----LDVYGDPKITGKIGTDIQDGKCTWLAVRALQKMHK 270

  Fly   235 -TQKQDKQVLHILRQRTHDIEVKKYCITLLEKLGSF-------QYTRKVLESLDAEARSEVARLG 291
             .:|...:::...:.....::.:|     :||:...       |..|:..:....|.:..::.:.
 Worm   271 TPEKWGAKLIEEFKTSFGSVDPEK-----VEKIKRIYDELQLKQEFRRFEKHFSGEIKKSISEIP 330

  Fly   292 S-----NPYMDRLLNKLLS 305
            .     .|.:|..:.||::
 Worm   331 DVINPLRPVLDGFVTKLVN 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
qmNP_523958.2 polyprenyl_synt 21..262 CDD:459773 55/222 (25%)
fdps-1NP_493027.1 Trans_IPPS_HT 44..268 CDD:173833 53/191 (28%)

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