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Protein Alignment Srp19 and srp19
DIOPT Version :9
Sequence 1: | NP_477135.2 |
Gene: | Srp19 / 38815 |
FlyBaseID: | FBgn0015298 |
Length: | 160 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001011122.1 |
Gene: | srp19 / 496535 |
XenbaseID: | XB-GENE-5919686 |
Length: | 142 |
Species: | Xenopus tropicalis |
Alignment Length: | 145 |
Identity: | 68/145 - (46%) |
Similarity: | 92/145 - (63%) |
Gaps: | 11/145 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 HNDMERWICIYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDVLSVSNLQFLME-NKKYCRENS 80
|..::|:|||||||:|.|||..||||:|.|..|.||:..||.|:...:.|..::| :|.|.||.:
Frog 8 HASVDRFICIYPAYLNSKKTIAEGRRIPIEKAVQNPTCSEIADICRANKLNAVVEGDKMYTREWN 72
Fly 81 SEMEFRGRVRVQLRNVDGTLYNNDFPTRESIMLHIASKIPQLKTRQNKSGDSYHQQSQPQSNASG 145
.:.:|||||||||||.||:...:...:|::|||.:|.:||:||||..|||.. .||..|
Frog 73 RDTQFRGRVRVQLRNEDGSSCVDKLSSRKAIMLRVAEEIPKLKTRTQKSGGG--DQSAQQ----- 130
Fly 146 SGGGGGGKKGKGKRR 160
|.||||.|.|::
Frog 131 ---GEGGKKNKKKKK 142
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Srp19 | NP_477135.2 |
SRP19 |
25..122 |
CDD:280156 |
48/97 (49%) |
srp19 | NP_001011122.1 |
SRP19 |
16..114 |
CDD:376664 |
48/97 (49%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
95 |
1.000 |
Domainoid score |
I7299 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
1 |
1.000 |
- |
- |
|
H2361 |
Inparanoid |
1 |
1.050 |
121 |
1.000 |
Inparanoid score |
I4613 |
OMA |
1 |
1.010 |
- |
- |
|
QHG55727 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1552706at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0003563 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto102817 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR17453 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X3986 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
11 | 11.080 |
|
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