DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srp19 and srp19

DIOPT Version :10

Sequence 1:NP_477135.2 Gene:Srp19 / 38815 FlyBaseID:FBgn0015298 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_998508.2 Gene:srp19 / 406652 ZFINID:ZDB-GENE-040426-2657 Length:141 Species:Danio rerio


Alignment Length:142 Identity:66/142 - (46%)
Similarity:93/142 - (65%) Gaps:10/142 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DMERWICIYPAYINRKKTRQEGRRLPKENCVDNPSYIEIRDVLSVSNLQFLMENKKYCRENSSEM 83
            |.||::||||||||.|||..||||:|.|..|:||:..||:.|||.:.|...:||..|.||.:.::
Zfish    10 DKERFLCIYPAYINSKKTLAEGRRIPTEKAVENPTCAEIQGVLSAAGLNVHVENSMYPREWNRDV 74

  Fly    84 EFRGRVRVQLRNVDGTLYNNDFPTRESIMLHIASKIPQLKTRQNKSGDSYHQQSQPQSNASGSGG 148
            :|||||||||:..||:...:.|.:|:.:|.::|..||:||:|..|||.:          .:|:..
Zfish    75 QFRGRVRVQLKMEDGSFCQDKFTSRKDVMFYVAEMIPKLKSRTQKSGGA----------EAGAQQ 129

  Fly   149 GGGGKKGKGKRR 160
            |.||||||.|::
Zfish   130 GEGGKKGKKKKK 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Srp19NP_477135.2 SRP19 25..122 CDD:460383 48/96 (50%)
srp19NP_998508.2 None

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