DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cln7 and ATR1

DIOPT Version :10

Sequence 1:NP_648107.3 Gene:Cln7 / 38813 FlyBaseID:FBgn0035767 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_013591.1 Gene:ATR1 / 854924 SGDID:S000004584 Length:542 Species:Saccharomyces cerevisiae


Alignment Length:238 Identity:47/238 - (19%)
Similarity:78/238 - (32%) Gaps:84/238 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 ETWKGIKPSYLS-AWTLIVAFFVLVFNFVLLETLGTSLTM-------DMFAWSNDEALWYMGIMM 309
            :.|:  .|:|.. ||...:..|..:.: .||...||:.|:       |.|....:...|.|    
Yeast    54 QKWQ--NPNYFKYAWQEYLFIFTCMIS-QLLNQAGTTQTLSIMNILSDSFGSEGNSKSWLM---- 111

  Fly   310 TTAAIVSLVTFVLIEPMCKIIAERYVLIWGGFSLMFLGRVLFVPWGPDPPKLAQPFNASWNLSES 374
                    .:|.|:.....:|:.|...|:|...::.:|.||.:.|.                   
Yeast   112 --------ASFPLVSGSFILISGRLGDIYGLKKMLLVGYVLVIIWS------------------- 149

  Fly   375 DPIFLGCPTTQKWCGELPALTLTQFIIGFAFTSIGYPIGVTLIQTIFSKVLGPRPQGVWMGWMTG 439
                |.|..| |:.|     :.|.|||..||..:|       |..:...|||             
Yeast   150 ----LICGIT-KYSG-----SDTFFIISRAFQGLG-------IAFVLPNVLG------------- 184

  Fly   440 SGCLSRVLGPVFVGSIYTR------LGTFWTFGVTSAMMLVSM 476
                  ::|.::||..:.:      :|.....|.|...:...:
Yeast   185 ------IIGNIYVGGTFRKNIVISFVGAMAPIGATLGCLFAGL 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cln7NP_648107.3 MFS_MFSD8 37..487 CDD:340884 47/238 (20%)
ATR1NP_013591.1 MFS_Amf1_MDR_like 73..517 CDD:341029 42/217 (19%)

Return to query results.
Submit another query.