DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cln7 and rtet

DIOPT Version :10

Sequence 1:NP_648107.3 Gene:Cln7 / 38813 FlyBaseID:FBgn0035767 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_524429.1 Gene:rtet / 42500 FlyBaseID:FBgn0028468 Length:477 Species:Drosophila melanogaster


Alignment Length:507 Identity:121/507 - (23%)
Similarity:192/507 - (37%) Gaps:159/507 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 VRIIYFTMFLMALGFSIIL---------------TGIWPYLNKLDPDAGKEFMGLIVAANP---- 82
            :.||:.::....|.|:|||               :|::..|.    |..:.|..|:.|.:.    
  Fly    50 IYIIFVSLLFDLLAFTIILPLLPSLLEHYRQNDSSGLYAVLT----DRVRWFQQLLGAPDRYISV 110

  Fly    83 -----LG------QMIFSPIFGWWGNKLGKIRLPLLLSLSLFTLASGIYSSLELRPDNVKYWMLS 136
                 ||      |.:.|||.|...:..|  |.|:||:     .||||..|..:       |..|
  Fly   111 LFGGFLGSMFSFLQFVASPIVGGLSDYYG--RKPVLLA-----CASGIALSYLI-------WACS 161

  Fly   137 S--------RFLIGVSSANIALCRSYLSAATRISERTHAVAMVSLAQVLGFIIGPTLQAAVTPLG 193
            |        ||:.|:|..||:||.|.::..:.:..|...:|:|.:|..||||:||.:.|......
  Fly   162 SNFALFVLARFVGGISKGNISLCMSVITDVSSVKTRGRGMALVGVAFSLGFIVGPMIGALFAIFS 226

  Fly   194 DQ-GHVW--LWGKMHFNMYTASGWINVL--------------------MSIGNFMMFLPGVFEEH 235
            |: |..|  |...:.|.:  |.|.:.||                    :|.|..::....:|...
  Fly   227 DKSGSTWFVLPSLLAFGL--AVGDLVVLACCLRETLPKEKRVKEISSALSYGLQLLNFSAIFRFA 289

  Fly   236 KIAAREVMVMQGGTSEKETWKGIKPSYLSAWTLI-VAFFVLVFNFVLLETLGTSLTMDMFAW-SN 298
            .|                  |.:....::|...| :.:|:.:|.:..||...|.|....|.: |.
  Fly   290 AI------------------KNVPKKDIAALRSIGLVYFLYLFLYSGLEFTVTFLMYHKFGYTSM 336

  Fly   299 DEALWYMGIMMTTAAIVSLVTFVLIEPMCKIIAERYVLIWGGFSLMFLGRVLFVPWGPDPPKLAQ 363
            |:|..:    :||..|::|:...::..:.:...:.|.:    ||| :|....||..|        
  Fly   337 DQAKMF----LTTGVIMTLLQGSVVRRLPEAKIKGYAI----FSL-YLIVPAFVVVG-------- 384

  Fly   364 PFNASWNLSE-SDPIFLGCPTTQKWCGELPALTLTQFIIGFAFTSIGYPIGVTLIQTIFSKVLGP 427
                   |:| |..::.|               :|.|.|..||       .||.:.|:.||....
  Fly   385 -------LAEGSRMLYAG---------------MTLFAISTAF-------AVTCLTTLVSKYGND 420

  Fly   428 RPQGVWMGWMTGSGCLSRVLGPVFVGSIYTRLGTFWTFG-----VTSAMMLV 474
            ..:|..:|.....|.|:|.|||| ||.|     .||..|     :...::|:
  Fly   421 DQKGSVLGIFRSLGALARALGPV-VGCI-----AFWCVGSRITYIAGGLLLI 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cln7NP_648107.3 MFS_MFSD8 37..487 CDD:340884 121/507 (24%)
rtetNP_524429.1 MFS_MFSD10 50..476 CDD:340947 121/507 (24%)

Return to query results.
Submit another query.