DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cln7 and CG18281

DIOPT Version :10

Sequence 1:NP_648107.3 Gene:Cln7 / 38813 FlyBaseID:FBgn0035767 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_649236.1 Gene:CG18281 / 40274 FlyBaseID:FBgn0037003 Length:542 Species:Drosophila melanogaster


Alignment Length:595 Identity:98/595 - (16%)
Similarity:199/595 - (33%) Gaps:226/595 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 WRSVRII---YFTMFLMALGFSIILTGIWPYLNKLDPDAGKEFM---GLIVAANPLGQMIFSPIF 92
            |.:|.:.   ||:..|:.:          |::.||....|...:   ||:.....:...:.:|:.
  Fly    26 WHAVIVTFMHYFSWGLLTV----------PFIEKLSGSFGNRVLLVDGLVYGVRGILGFVTTPVM 80

  Fly    93 GWWGNKLGKIRLPLLLSLSLFTLASGIYSSLELRPDNVKYWMLSSRFLIGVSSANIALCRS---- 153
            |...:..|: ::.:||:::. |.|.            :.:.||.|.:...:.:.: ::|.|    
  Fly    81 GAISDFHGR-KVVMLLAVAT-TYAP------------IPFMMLKSWWFFAILTVS-SICGSTYSS 130

  Fly   154 ---YLSAATRISERTHAVAMVSLAQVLGFIIGPTLQAAVTPLGDQGHVWL--WGKMHFNMYTA-S 212
               |::..|.:..|:....:|:.:...|....|:|          |:..:  :|.....:..| :
  Fly   131 SLAYVADTTTVENRSKGYGIVAASFGAGIAFSPSL----------GNYLMKSYGSASVILIAAIT 185

  Fly   213 GWINVLMSIGNFMMF-LPGVF-----------------------EEHKIAAREVMV--------- 244
            |.||::     |::| :|...                       |..:|..||..:         
  Fly   186 GLINIM-----FIIFAVPESLVLKEKNNMLDEESDNKMEDINPKERKEILNREEKLNNHVSANKS 245

  Fly   245 -----------------------MQGGTSEKE-----------TWKGIKPSYLSAWTLIVAF--F 273
                                   :|...:|||           .|:.::.|......|::..  |
  Fly   246 NHGTSQNLVTNKELGQQFNKEENLQNDLTEKEKIDNGSLNSSDLWEVLRKSRKDKNLLVIYLITF 310

  Fly   274 VLVFNFVLLETLGTSLTMDMFAWSN-----DEALWYMGIMMTTAAIVSLVTFVLIEPMCKIIAER 333
            :.::.|.     |...|..::..:|     :|....:|::    :::::.:.:|:..:..|:..:
  Fly   311 LSIWPFA-----GVDSTAPVYLKTNMGFEYEEVSMMLGLL----SVLAITSNLLLGYIINIVGAK 366

  Fly   334 YVLIWGGFSLMFLGRVLFVPWGPDPPKLAQPFNASWNLSESDPIFLGCPTTQKWCGELPALTLTQ 398
            :.:..|  .|:.|.::.|..:|                            |..|...|.::..  
  Fly   367 WSIRLG--LLLLLLQLFFFGFG----------------------------THHWMYWLSSILA-- 399

  Fly   399 FIIGFAFTSIGYPIGVTLIQTIFSKVLGPRPQGVWMGWMTGSGCLSRVLGPVFVGSIYTRLGTFW 463
                 |..:| .|.....:.:|::   .|..:|..:|.::|..|||..:||.|.|.:      |:
  Fly   400 -----ALATI-IPAANNAVASIYA---SPDNRGAVLGIISGIECLSEGVGPAFFGVL------FF 449

  Fly   464 TF---------------------GVTSAMMLVSMFWLQCSNRLLIPPTFEKTTPVELKELNKHNG 507
            .|                     ||..|::|..               |.|...||...|.    
  Fly   450 IFQDDSKNKVNSPISMPFVISAIGVFVAIVLTG---------------FIKKETVEKAPLI---- 495

  Fly   508 SKLLDDHSPD 517
            .|::||.|.|
  Fly   496 YKIIDDASED 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cln7NP_648107.3 MFS_MFSD8 37..487 CDD:340884 87/560 (16%)
CG18281NP_649236.1 MFS 25..485 CDD:475125 89/569 (16%)
235kDa-fam <203..>299 CDD:130673 10/95 (11%)

Return to query results.
Submit another query.