DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cln7 and samt-1

DIOPT Version :10

Sequence 1:NP_648107.3 Gene:Cln7 / 38813 FlyBaseID:FBgn0035767 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_500274.2 Gene:samt-1 / 177075 WormBaseID:WBGene00021870 Length:432 Species:Caenorhabditis elegans


Alignment Length:406 Identity:81/406 - (19%)
Similarity:142/406 - (34%) Gaps:106/406 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FETKRLPEDVDDGLETLEEYKQRWRSVRIIYFTMFLMALGFSIILTGIW---PYLNKLDPDAG-- 70
            |.|:...|..||         .:::|.:..|..:::||      :.|.|   |::..|....|  
 Worm    18 FYTRSATESNDD---------PKFKSFQRTYLIVYMMA------VAGDWLQGPHVYALYESYGMS 67

  Fly    71 KEFMGLIVAANPLGQMIFSPIFGWWGNKLGKI--------------------RLP-LLLSLSLFT 114
            |..:.::..|.....::|....|...:|.|:.                    .:| |::...|..
 Worm    68 KHQIEILFIAGFGSSLLFGTFIGSIADKFGRRNNCLMYAILYGGACITKHFGNMPVLMIGRFLGG 132

  Fly   115 LASGI-YSSLELRPDNVKYWML-------SSRFLIGVSSANIALCRSYLS-----AATRISERTH 166
            :|:.| ||:.|       .|::       .|..|:|...:|.||..|.::     ||..::||..
 Worm   133 IATSILYSAFE-------SWLIFEHNTRGFSDSLLGTVFSNAALGNSLIAIISGVAAQFVAERFG 190

  Fly   167 AVAMVSLA----QVLGFIIGPT---------------LQAAVTPLGDQGHVWLWGKMHF----NM 208
            .||...||    .::..||..|               .|.|...:.:..:|:..|.:..    :|
 Worm   191 FVAPFDLALSVLLIMAVIIMNTWPENYGNEKAPVKESFQKATQAIREDPNVFCLGLVQSLFEGSM 255

  Fly   209 YT-ASGWINVLMSIGNFMMFLPGVFEEHKIAAREVMVMQGGTSEKETWKGIKPSYLSAWTLIVAF 272
            || ...|...|......:    |:...:..||..|..|.|.:..|...:..:|.....:.|::|.
 Worm   256 YTFVLEWTPALSRAAGDV----GIPHGYIFAAFMVATMIGSSVFKLLQQHERPESFMRYVLLLAA 316

  Fly   273 FVLVFNFVLLETL----GTSLTMDM---FAWSNDEALWYMGIMMTT--AAIVSLVTFVLIEPMCK 328
            ..|....|..::|    |..|..:|   ..|.:      ||.:..|  :......|..|......
 Worm   317 VCLSMPIVAPDSLALVFGGFLVFEMCCGIFWPS------MGCLRGTYVSEETRSTTLNLFRVPLN 375

  Fly   329 IIAERYVLIWGGFSLM 344
            :|.  ..::|..|:::
 Worm   376 LIV--IFILWQNFTMI 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cln7NP_648107.3 MFS_MFSD8 37..487 CDD:340884 75/380 (20%)
samt-1NP_500274.2 MFS 1..338 CDD:475125 70/345 (20%)

Return to query results.
Submit another query.