DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eco and esco1

DIOPT Version :9

Sequence 1:NP_648106.1 Gene:eco / 38812 FlyBaseID:FBgn0035766 Length:1052 Species:Drosophila melanogaster
Sequence 2:XP_002934171.2 Gene:esco1 / 733526 XenbaseID:XB-GENE-5872095 Length:989 Species:Xenopus tropicalis


Alignment Length:1148 Identity:245/1148 - (21%)
Similarity:413/1148 - (35%) Gaps:342/1148 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PSRMATPRLSERKRQLFGSPRSRLRQINDDEDDADVDSLGVLPLKTHVAANRKGRSLFAAVPGKS 74
            |||:              ||:..|::..::...|..::...:|:|..|....|.....:.:...|
 Frog    72 PSRL--------------SPQKVLQKKINERKSAKANTAKSVPVKRSVLKTTKEAPTSSRITQVS 122

  Fly    75 SSSANSSPETNK---ENKKTRGGVMTATAEQLPQLF--TATMRLNSNSSSNSRNSSPRQTRVQRK 134
            .||..:|..:.:   |||:........|::....|.  |:..||..::|..:..|   :|..:|.
 Frog   123 RSSGQASTASKRGKAENKRANMQNSKNTSKVGKNLVKNTSLARLKVSASGKNEKS---KTGTKRS 184

  Fly   135 RADSSMSSPTSSSEGTPSSRARNSIRRSPRTFSAQKDPDAFSSPESFQTRLSKVAA-----MLMK 194
            .....:....:.|:.||.:..:|...|..:|...:..|          |.:.|..|     :.::
 Frog   185 SRLLELKQGKAQSKETPKNAKKNLSIRCTKTEPLKGRP----------TSVKKTPAQNKGNIELR 239

  Fly   195 GQDSRSMLEKSKKKHNHSLKTTAQVHTTKPKKTSPAEESQSDDEKPSSSKNSRKNTEVRETRSSQ 259
            |:..|..::|.......::....:.|........|         |.||||...|..:|..|.|..
 Frog   240 GKADRKSIQKISASKESAVIGKKKAHICTITHAQP---------KESSSKKHGKQLQVTITSSQA 295

  Fly   260 IISPKTRNRRRPFTS--ADINCKTLKAAAHLHENMRSYDEEKTAAVKLENSRSRSKSPVEVFK-- 320
            ..|...:::|.|..|  :..|.||.:.     :......:....|||....|:|.|.|.|..|  
 Frog   296 KKSNSRQSKRTPRLSSLSPANRKTQRG-----KTQECQGQGIKTAVKSRTLRTRVKGPNEGTKLK 355

  Fly   321 -SNDDAVKRNTGNTNNKTAKSSEVATAKRPESPGSSMKIDVEVPESDEEA--------------S 370
             ..::.:| |.| |||  .|:.|:|          |.|.:.:|.|::.:|              .
 Frog   356 AIQNEGIK-NMG-TNN--GKAIELA----------SFKSNTDVTENEVDACCLSSGVSLSKEPLE 406

  Fly   371 NHKPQKRQHPETSTPVAPSADADSGSPQSKMRKVTLSSSIPTMAFYSHSGEAVTKSRRRPSISKN 435
            ..:|.|.:...|.||..........||    :|||:                    .||.::|..
 Frog   407 KAEPTKWKTSSTDTPAKKKTPCAKASP----KKVTV--------------------ERRKTVSGT 447

  Fly   436 SLKQPTKISPTSRPLLGINKGVHHKIRKRHGFANRLPATDMDNILNSLSNERLKNLITTKREERA 500
            :..:||...|              .:.|    |.|:...|   |.|.::.|              
 Frog   448 AKNKPTPSLP--------------DVPK----AKRISILD---ICNEIAGE-------------- 477

  Fly   501 KVEEVHQILRNAKDPIKMAKPLSVIEADDANNNNNLPATAWQETSADFSDLSDVEDIDPIIE--- 562
                                    ||:|......::|::            .|::..|.:||   
 Frog   478 ------------------------IESDTVEVKKDVPSS------------QDMQQKDHLIEENK 506

  Fly   563 --VEP-IIPIIRHEPVQKSPTAEPADLSKRKFFKSGRRSSTCMEVRITDNIRASVSQGKIELVQT 624
              .:| .|.:...|...||        ..::||.|  |::..::.::......::...|.     
 Frog   507 ESAQPEAIHLCHGEEKNKS--------HSKRFFSS--RTAVRLKCKLDRKTSPALKNSKW----- 556

  Fly   625 IRRKPRQVRVKSATIFSAEQATVD-AILKNLDDTVVDEIVEANPVVQATPIDAEETTMET--ESL 686
                 .::::..|...|......: |||.|||      :::|...:..|...|..|..:|  :.|
 Frog   557 -----NKIKLNKANNLSRMNIPRNRAILPNLD------VIKARSKLSQTGQLAASTLDKTLDKKL 610

  Fly   687 P---DIIEYAPEA--------------------------NDVEIDPFAEFRQRL-------PYQ- 714
            |   :.:.|.|::                          :|:||.....||..|       |.: 
 Frog   611 PVEMNTVSYLPDSKKTKPAAIQKNKQEKTENGVLDKHINHDLEITFDEGFRLHLDSSPESSPLKK 675

  Fly   715 --TDDPNVVEQQQILLEFLISNNICTEKNFEIFIANPDDYKDEANQIVDNLYMVVNSEEAAQLAQ 777
              |..|.:..:||  ...:|::..|..|  ::|                      ||....|:|.
 Frog   676 PPTKPPQLQSEQQ--NPDVIASKACASK--QLF----------------------NSSLTDQMAP 714

  Fly   778 METVEN---TAVAIAPKQDAPAVEEVQPKLFPIFTQRLQPVVQKSLRRRPDTSMRLLTAAGGSNQ 839
            .:...|   :.|:.|....:.|              .:|..|:|......|          |:.|
 Frog   715 SDEGRNRLTSRVSSAKSTSSEA--------------NIQKEVKKLKEAEKD----------GNKQ 755

  Fly   840 YQIDAGQKAFGARQCQQCGLVYTVHEPEEELLHREYHNS-IHVLRFKGWIDEDIVSVYPEWASDG 903
            ..||||||.|||..|..||::||...||:|..|..:||. |..:::.||..|.||:.:|    ||
 Frog   756 AIIDAGQKRFGAISCNVCGMLYTASNPEDEAQHLLFHNQFISAVKYVGWKKERIVAEFP----DG 816

  Fly   904 RIIRINERAPTARLDRLRDLIGVVDKELGYSSYIVP---------KIFVAFIAVRKQQIVGFCLV 959
            |:|.:....|...|.::.::..:||.:||:..  ||         .:|::    ..:::||..:.
 Frog   817 RVIMVLPDDPKYALKKVDEIREMVDNDLGFQQ--VPLRLHSRTKTLLFIS----NDKKVVGCLIA 875

  Fly   960 QPLSQAHRFI---QVDGTD-------------YFSEESYPASCGVSRIWVSPLQRRSGIASKLLR 1008
            :.:...:|.|   ..:||.             ..|....||.||||||||..:.||..|||::|.
 Frog   876 EHIQWGYRVIDDLSPEGTSEKEKAISERVKAWCCSTSPEPAICGVSRIWVFSMMRRKKIASRMLE 940

  Fly  1009 VVQCHTVLGQEIARECIAFSTPTDDGRALARQFTGLDNFLTYD 1051
            .::.:.:.|..:.::.||||.||.||:..|.::.|...||.|:
 Frog   941 CLRNNFIYGSFLNKDEIAFSDPTPDGKLFATRYCGTSQFLVYN 983

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecoNP_648106.1 zf-C2H2_3 839..878 CDD:290589 20/38 (53%)
NAT_SF 945..>1008 CDD:173926 22/78 (28%)
Acetyltransf_13 982..1043 CDD:290591 26/60 (43%)
esco1XP_002934171.2 PTZ00121 <2..535 CDD:173412 120/622 (19%)
zf-C2H2_3 755..794 CDD:404719 20/38 (53%)
Acetyltransf_13 914..982 CDD:404721 29/67 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I9967
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 163 1.000 Inparanoid score I4100
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002145
OrthoInspector 1 1.000 - - otm48340
Panther 1 1.100 - - O PTHR45884
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2551
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.150

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