DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eco and Esco1

DIOPT Version :10

Sequence 1:NP_648106.1 Gene:eco / 38812 FlyBaseID:FBgn0035766 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001119771.2 Gene:Esco1 / 680014 RGDID:1596873 Length:840 Species:Rattus norvegicus


Alignment Length:955 Identity:207/955 - (21%)
Similarity:353/955 - (36%) Gaps:227/955 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 SMLEKSKKKHNHSLKTTAQVHTTKPKKTSPAEESQSDDEKPSSSKNSRKNTEVRETRSSQIISPK 264
            |:.||||:..:..:|.:...:..:     ..|.||:...|.|.||.:.|:. ||.:..|::...:
  Rat     2 SIQEKSKENSSKVIKESEGENLEQ-----EIEGSQNSLAKKSGSKEAGKSA-VRFSNKSKVNQSE 60

  Fly   265 TRNR---RRPFTSADINCKTLKAAAHLHENMRSYDEEKTAAVK---------------------- 304
            ...|   |....|||.|     |...:::||.|...:...::|                      
  Rat    61 IGTRMSTRSASCSADKN-----ATNSINKNMVSVKGQSQESLKKKKLCQEKLSFGTFKGSEQLNR 120

  Fly   305 -------LENSRSRS------KSPVEVFKSNDDAVKRNTGNTNNKTAKSSEVATAKRPESPGSSM 356
                   |..|.:||      :..::..|.|....:|...|:.............||     ..:
  Rat   121 RSQRLQQLTESLTRSLRSREIQGQIQTVKQNLQPARREQCNSTQSKCNKVNQKHVKR-----KVL 180

  Fly   357 KIDVEVPESDEEASNH-------KPQKRQHPETSTPVAPSADADSGSPQSKMRKVTLSSSIPTMA 414
            :|..:..|.....:|.       |.:|.||..|||..:..........|..:||.. :..:|..|
  Rat   181 EIKSDCKEDRHSVTNEVINSPKGKKRKVQHQTTSTCSSQCIQGSEKCLQKTIRKEE-TKPVPVTA 244

  Fly   415 FYSHSGEAVTKSRRRPSISKNSLKQ---PTKISPTSRPLLGINKGVHHKI----RKRHGFANRLP 472
            .......|.:...:|..:.|::..|   .||......||:. ...|.|::    :.:.|...:|.
  Rat   245 EIRKLKTATSVVSKRNELRKSAHTQVSASTKFPQIPLPLVP-EHSVDHELEQPGKSKRGSILQLC 308

  Fly   473 ATDMDNILNSLSNERLKNLITTKREER---AKVEE-------VHQ------ILRNAKDPIKMAKP 521
            ......|.:.....:.::.:.:.:||:   .|:||       :||      :..|...|.:..||
  Rat   309 EEIAGEIESDTVEVKKESCVESVKEEKPAEVKLEETDAERQTLHQKETNQDVQCNRFFPSRKTKP 373

  Fly   522 ----LSVIEADDANNNNNLPATAWQETSADFSDLSDVEDIDPIIEVEPIIPIIRHEPVQKSPTAE 582
                |:.|.:....|:|      |  |....|..:.|.......:|.|.:.::  :.....|..|
  Rat   374 VKCVLNGINSSTKKNSN------W--TKIKLSKFNSVHQHKLDSQVSPKLSLL--QTFLSPPVLE 428

  Fly   583 -PADLSKRKFFKSGRRSS-TCMEVRITDNIRASVSQG-KIELVQTIRRKPRQVRVKSATIFSAEQ 644
             |..:|:..|.:.....: ||.:    |.::...|:. ||..:        .:.:..||..:...
  Rat   429 MPHPVSQSTFLEMKPHGTVTCQQ----DKMKGIKSEDVKINNI--------AIEINKATKRAPGN 481

  Fly   645 ATVDAILKNLDDTVVDEIVEANPVVQATPIDAEETTMETESLPDIIEYAPEANDVEIDPFAEFRQ 709
            ..:|..:|...|:.:|                .:.....||.||.......|::||.:|      
  Rat   482 CNLDNHIKPSSDSSLD----------------NQMKHSCESAPDQNFSICSASEVETNP------ 524

  Fly   710 RLPYQTDDPNVVEQQQILLEFLISNNICTEKNFEIFIANPDDYKDEANQIVDNLYMV--VNSEEA 772
                       :|....:...|....|..::.|      |....::.:.|:.|...:  .|.:..
  Rat   525 -----------LENTAAVSTLLSQARIDGDRKF------PGSAPNQQHSILSNEASINRKNRDTP 572

  Fly   773 AQLAQMETVENTAVAIAPK----QDAPAVEEVQPKLFPIFTQRLQPVVQKSLRRRPDTSMRLLTA 833
            ...:|::...|..:.| ||    :|:..|:|                                  
  Rat   573 PNHSQLKCNSNLEITI-PKSLKLKDSEKVDE---------------------------------- 602

  Fly   834 AGGSNQYQIDAGQKAFGARQCQQCGLVYTVHEPEEELLHREYHNS-IHVLRFKGWIDEDIVSVYP 897
                .|..||||.|.|||..|..||::||...||:|..|..:||. |..:::.||..|.|::.||
  Rat   603 ----KQLVIDAGHKRFGAVSCNICGMLYTASNPEDETQHLLFHNQFISAVKYVGWKKERILAEYP 663

  Fly   898 EWASDGRIIRINERAPTARLDRLRDLIGVVDKELGYSS-----YIVPKIFVAFIAVRKQQIVGFC 957
                |||||.:....|...|.::.::..:||.:||:..     |...|..: ||: ..:::||..
  Rat   664 ----DGRIIMVLPEDPKYALKKVDEIREMVDNDLGFQQAPLMCYSRTKTLL-FIS-NDKKVVGCL 722

  Fly   958 LVQPLSQAHRFIQVDGTDYFSEES----------------YPASCGVSRIWVSPLQRRSGIASKL 1006
            :.:.:...:|.|:.......|||.                .||.||:|||||..:.||..|||::
  Rat   723 IAEHIQWGYRVIEEKLPVIRSEEEKVRFERQKAWCCSTLPEPAICGISRIWVFSMMRRKKIASRM 787

  Fly  1007 LRVVQCHTVLGQEIARECIAFSTPTDDGRALARQFTGLDNFLTYD 1051
            :..::.:.:.|..:::|.||||.||.||:..|.|:.|...||.|:
  Rat   788 IECLRSNFIYGSYLSKEEIAFSDPTPDGKLFATQYCGTGQFLVYN 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecoNP_648106.1 PRK08581 189..>477 CDD:236304 65/328 (20%)
zf-C2H2_3 839..878 CDD:464013 19/38 (50%)
NAT_SF 945..>1008 CDD:173926 23/78 (29%)
Acetyltransf_13 982..1050 CDD:464015 29/67 (43%)
Esco1NP_001119771.2 zf-C2H2_3 604..643 CDD:464013 19/38 (50%)
Acetyltransf_13 763..831 CDD:464015 29/67 (43%)

Return to query results.
Submit another query.