DRSC/TRiP Functional Genomics Resources

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Protein Alignment eco and DNApol-iota

DIOPT Version :9

Sequence 1:NP_648106.1 Gene:eco / 38812 FlyBaseID:FBgn0035766 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_001287227.1 Gene:DNApol-iota / 40965 FlyBaseID:FBgn0037554 Length:737 Species:Drosophila melanogaster


Alignment Length:314 Identity:74/314 - (23%)
Similarity:121/314 - (38%) Gaps:75/314 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 KRAD---SSMSSPTSSSEGTPSSRARNS----IRRSPRTFSAQKDPDAFSSPESFQTRLSKVAAM 191
            |:||   .|::|.|::|..:|::.:..|    .|.||.||   |..|.|....:  |..|.|..:
  Fly   428 KKADLEVQSITSLTNTSLTSPTAESPTSDECAFRSSPTTF---KPSDQFYRRRA--TTASPVPML 487

  Fly   192 LMKGQD-----------SRSMLEKSKKKH-------NHSLKTTAQVHTTKPKKTSPAEESQSDDE 238
            |..|.:           |.:.:|.|.||.       :...:..|.|..:..:..||::....|  
  Fly   488 LDNGSESAATNSDFSDFSETEVEPSPKKSRIGRLLVSKRSRLAADVGDSAAEVASPSKLRVCD-- 550

  Fly   239 KPSSSKNSRKNTEVRETRSSQIISPKTRNR--RRPFT-----SADINCKTLKAAAHLHENMRSYD 296
            ...:|::|.|:..:..|.|:...:|..|.|  :.|.|     ...:...|.:.|:.|..|..|  
  Fly   551 LRLNSRDSEKDFPMSTTPSTSTSAPAPRFRTVQPPNTLLQRIDGSLRFVTTRTASRLSSNASS-- 613

  Fly   297 EEKTAAVKLENSRSRSKSPVEVFKSNDDAVKRNTGNTN-------NKTA---KSSEVATAKRPES 351
               ||:..|       .||:      ||::..:..:|.       ..||   .||..||.....:
  Fly   614 ---TASSPL-------PSPM------DDSIAMSAPSTTTLPFPSPTTTAVVTSSSSTATCDALTN 662

  Fly   352 ----PGSSMKIDVEVP---ESDEEASNHKPQKRQHPETS-TPVAPSADADSGSP 397
                .|...::..|:|   :::..||..........:|: |..|.||...||:|
  Fly   663 IVCPAGVDAEVFKELPVELQTELIASWRSSLVAAVEQTNGTGAATSAAIASGAP 716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecoNP_648106.1 zf-C2H2_3 839..878 CDD:290589
NAT_SF 945..>1008 CDD:173926
Acetyltransf_13 982..1043 CDD:290591
DNApol-iotaNP_001287227.1 PolY_Pol_iota 18..411 CDD:176457
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452760
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4551
SonicParanoid 00.000 Not matched by this tool.
21.960

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