DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eco and Rev1

DIOPT Version :9

Sequence 1:NP_648106.1 Gene:eco / 38812 FlyBaseID:FBgn0035766 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_612047.1 Gene:Rev1 / 38079 FlyBaseID:FBgn0035150 Length:995 Species:Drosophila melanogaster


Alignment Length:895 Identity:158/895 - (17%)
Similarity:282/895 - (31%) Gaps:313/895 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 FSAQKDPDAFSSPESFQTRLSKVAAMLMKGQDSRSMLEKSKKKHNHSLKTTAQVHTTKPKKTSPA 230
            |...||..|..|....:....|....:...:|...|      :....||...|...|.|:|    
  Fly   134 FGKPKDNGANESKSDVEPPKDKAEVEVDSTKDETQM------ELGGILKNLQQAVATSPEK---- 188

  Fly   231 EESQSDDEKPSSSKNSRKNTEVRETRSSQIISPKTRN--------------------RRRPFTSA 275
            |.|.|:.:..:.|..|..:|..|.......:|...:|                    |::..|..
  Fly   189 EASASESKITNLSTTSNNSTTARTAADPNFLSEFYKNSRLHHIATLGAGFKQYVCRLRQKHGTQG 253

  Fly   276 DINCKTLKAAAHLHEN-------------------MRSYDEEKTAAVKLENSRSRS--------- 312
            ....:|||:.|:.|.|                   :|:..|.:...:.:.:|:..:         
  Fly   254 FPKRETLKSLANSHHNCLERYVMHIDMDCFFVSVGLRTRPELRGLPIAVTHSKGGNAATDVPVHP 318

  Fly   313 ----KSPVEV--------FKSNDDAVKRNTGNTNNKTAKSSEVATA---------KRPESPGSSM 356
                |:.:|:        |...|.|.|..:|  .:|....||:|:.         :.....|.::
  Fly   319 QADRKAELELFAQRFEHHFHDGDKAEKVRSG--FDKKMSLSEIASCSYEAREKGIRNGMFVGQAL 381

  Fly   357 KIDVEVPESDEEASNHKPQKRQHPETSTPVAPSADADSGSPQ-SKMRKVTLSSSIPTMAFYSHSG 420
            |:..|:.....:...:|.......:|......:.:|.|.... .::..:....::..|||.||..
  Fly   382 KLCPELKTIPYDFEGYKEVAFTLYDTVAQYTLNIEAVSCDEMFVELTDLAHELNVDVMAFVSHLR 446

  Fly   421 EAVTKSRRRP---SISKNSL--KQPTK-------------------ISPTSRPLL-GINKGVHHK 460
            :.|......|   .::.|.|  :..||                   ::|.|..|| |:...:.||
  Fly   447 QEVYSKTGCPCSAGVAGNKLLARMATKEAKPNGQFLLDSSNDILAYMAPMSLDLLPGVGSSISHK 511

  Fly   461 IRKRHGFANRLPATDMDNILNSLSNERLKNLITTKREERAKVEEVHQILRNAKDPIKMAKPLSVI 525
            : |:.|..|   ..|:.|               |..|:..||               :.|.|   
  Fly   512 L-KQAGLNN---CGDVQN---------------TTLEKMEKV---------------LGKKL--- 539

  Fly   526 EADDANNNNNLPATAWQETSADFSDLSDVEDIDPIIEVEPIIPIIRHEPVQKSPTAEPADLSKRK 590
                   ..||           |.:...::|       .|    :.:|.::|:.:||        
  Fly   540 -------GQNL-----------FQNCRGIDD-------RP----LAYEQIRKTVSAE-------- 567

  Fly   591 FFKSGRRSSTCMEVRITDNIRASVSQGKIELVQTIRRKPRQVRVKSATIFSAEQATVDAILKNLD 655
             ...|.|.:..:|   .:.....:|:...:.:..||||.|.:.:|.                   
  Fly   568 -MNFGIRFTNSVE---CEQFLCQLSEEVTKRLVEIRRKARSINLKI------------------- 609

  Fly   656 DTVVDEIVEANPVVQATPIDAEETTMETESLPDIIEYAPEANDVEIDPFAEFRQRLPYQTDDPNV 720
                        :|:|.....|.:......:.|||..:               ..:.|.|||.||
  Fly   610 ------------MVRAAEAPVETSKYMGHGVCDIINKS---------------SLIKYATDDVNV 647

  Fly   721 VEQQQILLEFLISNNICTEKNFEIFIANPDDYK---------DEANQI--VDNLYMVVNSEEAAQ 774
            :  ..::|:.:        |:.:|   .||:.:         ::||::  .:|:     .|...:
  Fly   648 I--TTVVLDLM--------KDADI---PPDELRGLGIHLTRLEDANEVRKENNI-----KEMFGK 694

  Fly   775 LAQM---ETVENTAVAIA----PKQDAPAVEEVQPKLFPIFTQRLQPVVQKSLRRRPDTSMRLLT 832
            :::|   :.:...||...    .|.:.|.|.|.:||                 .|.|...:.:||
  Fly   695 MSEMRKDKPIPQGAVGDKSIGDDKVNKPLVFENKPK-----------------PREPRNVLSMLT 742

  Fly   833 AAGGSNQ-YQIDAGQKAFGARQCQQCGLVYTVHE------PE----EELLHREYHNSIHVLRFKG 886
            ||..|.: ...|..|:.......:...||..:.|      ||    |.:.:||.|  :.:..:.|
  Fly   743 AAAVSRKSVTEDRSQRGTSKPITRPLSLVPKLDEDVLAQLPEDIRLEVIANREEH--LCIAEYDG 805

  Fly   887 WIDED--------------IVSVYPEWASDGRIIRINERAPTARLDRLRD 922
            :....              ..:|.|..|:|  :.....||..|||.:.::
  Fly   806 YRSPQYPTLRSPPLLNPYVTTNVSPLKATD--LKPSTSRAAVARLQKRKE 853

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecoNP_648106.1 zf-C2H2_3 839..878 CDD:290589 11/49 (22%)
NAT_SF 945..>1008 CDD:173926
Acetyltransf_13 982..1043 CDD:290591
Rev1NP_612047.1 BRCT_Rev1 39..121 CDD:349351
PolY_Rev1 218..676 CDD:176455 96/596 (16%)
Rev1_C 890..985 CDD:213388
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452759
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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