DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eco and Poli

DIOPT Version :9

Sequence 1:NP_648106.1 Gene:eco / 38812 FlyBaseID:FBgn0035766 Length:1052 Species:Drosophila melanogaster
Sequence 2:NP_036102.2 Gene:Poli / 26447 MGIID:1347081 Length:737 Species:Mus musculus


Alignment Length:661 Identity:123/661 - (18%)
Similarity:202/661 - (30%) Gaps:236/661 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 SPRQTRVQRKRADSSMSSPTSSSEGTPS--SRARNSIRRSPRTFSAQ----KDPDAFSSPESFQT 183
            :||  .::...|.::.||....|:|.|:  |.:|..:......|.||    .:|:....|...|.
Mouse    17 APR--AMEPLHAGAAGSSRAVCSQGPPTQISSSRVIVHVDLDCFYAQVEMISNPELKDRPLGVQQ 79

  Fly   184 RLSKVAA----------MLMKGQDSRSML--------EKSKKKHNHSLKTTAQVHTTKPKKTSPA 230
            :...|..          .||..:|::...        |...:....|.|.|..:     ::.|||
Mouse    80 KYLVVTCNYEARKLGVRKLMNVRDAKEKCPQLVLVNGEDLSRYREMSYKVTELL-----EEFSPA 139

  Fly   231 EESQSDDEKPSSSKNSRKNTEVRETRSSQIIS---PKTRNRRRPFTSADINCKTL---------K 283
            .|....||      |....||:.|.|..|:.|   |........:.:..:|...:         :
Mouse   140 VERLGFDE------NFVDLTEMVEKRLQQLPSEEVPSVTVFGHVYNNQSVNLHNIMHRRLVVGSQ 198

  Fly   284 AAAHLHENMRSYDE-EKTAAVKLENSRSRSKSPVEVFKSNDDAV------KRNTGNTNN-KTAKS 340
            .||.:.|.|  |:: ..|....:..::..:|....|||.|...|      :....:.|: |....
Mouse   199 IAAEMREAM--YNQLGLTGCAGVAPNKLLAKLVSGVFKPNQQTVLLPESCQHLIHSLNHIKEIPG 261

  Fly   341 SEVATAKRPESPGSSMKIDVE---VPESDEE---ASNHKPQKRQHPETSTPVAPSADADSGSPQS 399
            ....||||.|..|.:...|::   :...::|   |...:.|:....|..:||.|     ||.|||
Mouse   262 IGYKTAKRLEVLGINSVHDLQTFPIKTLEKELGIAIAQRIQQLSFGEDKSPVTP-----SGPPQS 321

  Fly   400 KMRKVTLSSSIPTMAFYSHSGEAVTKSRRRPSISKNSLKQPTKISPTSRPLLGINKGVHHKIRKR 464
            ...:.|         |...|.|...|::                                     
Mouse   322 FSEEDT---------FKKCSSEVEAKAK------------------------------------- 340

  Fly   465 HGFANRLPATDMDNILNSLSNERLKNLITTKREERAKVEEVHQILRNAKD----------PIKMA 519
                               ..|.|.:|:|...::..|...|..::|...|          ||   
Mouse   341 -------------------IEELLSSLLTRVCQDGRKPHTVRLVIRRYSDKHCNRESRQCPI--- 383

  Fly   520 KPLSVIEADDANNNNNLPATAWQETSADFSDLSDVEDIDPIIEVEPIIPIIRH------------ 572
             |..||:.....|::::|                     |:|::  ::.:.|:            
Mouse   384 -PSHVIQKLGTGNHDSMP---------------------PLIDI--LMKLFRNMVNVKMPFHLTL 424

  Fly   573 -----------EPVQKSP-------TAEPADLSKRKF----------FKSGRRSSTCMEVRITDN 609
                       ...:|.|       .:.||...||.|          .|....:..|:..|..: 
Mouse   425 MSVCFCNLKALSSAKKGPMDCYLTSLSTPAYTDKRAFKVKDTHTEDSHKEKEANWDCLPSRRIE- 488

  Fly   610 IRASVSQGKIELVQTIRRKPRQVRVKSATIFSAEQATVDAILKNLDDTVVDEIVEANPVVQATPI 674
               |...|:..|              .||.|..|:.|.|..|:.|.:.|..|      |.:..|.
Mouse   489 ---STGTGESPL--------------DATCFPKEKDTSDLPLQALPEGVDQE------VFKQLPA 530

  Fly   675 DAEETTMETES 685
            |.:|..:..:|
Mouse   531 DIQEEILSGKS 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ecoNP_648106.1 zf-C2H2_3 839..878 CDD:290589
NAT_SF 945..>1008 CDD:173926
Acetyltransf_13 982..1043 CDD:290591
PoliNP_036102.2 PolY_Pol_iota 51..431 CDD:176457 85/489 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4551
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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