Protein Alignment lark and NOP13

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_014224.2
• Gene: NOP13 / 855547
• SGDID: S000005119
• Length: 403
• Species: Saccharomyces cerevisiae
• Alignment Length: 205
• Identity: 49/205 - (23%)
• Similarity: 84/205 - (40%)
• Gaps: 53/205 - (25%)

  Fly     7 FKLFIGNLDEKTQATELRALF--------EKYGTVVECDV---------------VKNYGFVHM- 47
            :.::||||...|...:|...|        ::...|.|.|:               :||.||.:|
Yeast   125 YGVWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQDITRLSMPRVAAKNSNAMKNKGFCYMF 189

  Fly    48 -ETEQQGRDAIQ----NLNGYTLNEFAIKVEAAKSRR---------APNTPTTKIFVGNLTDKTR 98
             :..:|.:..::    :|||   ....||.....|.|         :.|.|:..:|||||:....
Yeast   190 FKNVEQMKAVLELSESHLNG---RNMLIKDSENYSGRPDKDDLVAMSKNPPSRILFVGNLSFDVT 251

  Fly    99 APEVRELFQKYGTVVEC------DIVRNYGFVHLDCVGD--VQDAIKELNGRVVDGQPLKVQVST 155
            ...:|:.||..|.:|:.      |..:..||..:|...:  ..:|:|:.:.|.:.|:||:::...
Yeast   252 DDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEGSTNALKDKSCRKIAGRPLRMEYGE 316

  Fly   156 SR----VRPK 161
            .|    ||.|
Yeast   317 DRSKRQVRKK 326

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	21/93 (23%)
		RRM1_2_CoAA_like	87..152	CDD:409779	20/72 (28%)
		hnRNP-R-Q	<88..>258	CDD:273732	24/86 (28%)
NOP13	NP_014224.2	RRM1_Nop13p_fungi	127..217	CDD:409830	21/92 (23%)
		RRM2_Nop13p_fungi	241..316	CDD:409831	20/74 (27%)