Protein Alignment lark and AT1G78260

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_565175.1
• Gene: AT1G78260 / 844161
• AraportID: AT1G78260
• Length: 287
• Species: Arabidopsis thaliana
• Alignment Length: 272
• Identity: 63/272 - (23%)
• Similarity: 99/272 - (36%)
• Gaps: 68/272 - (25%)

  Fly    79 RAP--NTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIV--------RNYGFVHLDCVGDVQ 133
            |:|  :|..||:|||.|..:|...|:|..|:::|.::|..|:        :.||||.........
plant     8 RSPFGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDSAT 72

  Fly   134 DAIKELNGRVVDGQPLKVQV-STSRVRPKPGMGDPEQCYRCGRSGHWSKECPRLYGSAGGGREPP 197
            .|:.:.| .|:||:.....: |..|.||.|                     ||..|..|.    |
plant    73 RAVADPN-PVIDGRKANCNIASFGRPRPSP---------------------PRGRGQTGS----P 111

  Fly   198 SPLSAGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFEDSRDLYERRYQTSRMRD- 261
            |...:||.........|.||...|      ::|.....|.|...:|...:.||..:.|.::...
plant   112 SQYQSGGPSTYTGMAAPLPPAAAP------QLMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQ 170

  Fly   262 --------FPPPPISRREPMPLPPTLSGSLRSCSVSRGYDTMFSRRSPPPP-RSSNGMSRYGSPT 317
                    ...|..|....||.|               |...:|.::|..| :..:.:.:..:|.
plant   171 QQQLYGGGATSPSSSGATIMPSP---------------YYYGYSLQAPRVPYQHHHHLPQPYNPQ 220

  Fly   318 PHGYEDFSRDAF 329
            .|.::.||..:|
plant   221 QHHHQRFSSPSF 232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779
		RRM1_2_CoAA_like	87..152	CDD:409779	21/72 (29%)
		hnRNP-R-Q	<88..>258	CDD:273732	44/178 (25%)
AT1G78260	NP_565175.1	RRM_RBM24_RBM38_like	17..92	CDD:409818	22/75 (29%)