DRSC/TRiP Functional Genomics Resources

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Protein Alignment lark and AT1G22910

DIOPT Version :10

Sequence 1:NP_523957.1 Gene:lark / 38811 FlyBaseID:FBgn0011640 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_973889.1 Gene:AT1G22910 / 838898 AraportID:AT1G22910 Length:347 Species:Arabidopsis thaliana


Alignment Length:17 Identity:5/17 - (29%)
Similarity:9/17 - (52%) Gaps:0/17 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PAMFRATFDCRGSSDTV 28
            |..|.:..:.:|.:.||
plant   355 PLHFESISETQGDATTV 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
larkNP_523957.1 RRM1_2_CoAA_like 8..73 CDD:409779 5/17 (29%)
RRM1_2_CoAA_like 87..152 CDD:409779
hnRNP-R-Q <88..>258 CDD:273732
AT1G22910NP_973889.1 RRM_RBM24_RBM38_like 13..88 CDD:409818
Blue background indicates that the domain is not in the aligned region.

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