Protein Alignment lark and AT5G40490

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_198865.1
• Gene: AT5G40490 / 834047
• AraportID: AT5G40490
• Length: 423
• Species: Arabidopsis thaliana
• Alignment Length: 236
• Identity: 58/236 - (24%)
• Similarity: 88/236 - (37%)
• Gaps: 44/236 - (18%)

  Fly     8 KLFIGNLDEKTQATELRALFEKYGTVVECDVVKN--------YGFVHMETEQQGRDAIQNLNGYT 64
            |:|:|.|..:|.:.|....|.|||.:.:..::|:        :|||...........||:
plant    43 KIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQD----- 102

  Fly    65 LNEFAIKVEAAKSRRAP-------NTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRN-- 120
             |...|..:....|..|       :..|.|||||.:.......|.:|.|.::|.:.|..|:|:
plant   103 -NHIIIGKQVEIKRTIPRGSMSSNDFKTKKIFVGGIPSSVDDDEFKEFFMQFGELKEHQIMRDHS 166

  Fly   121 ------YGFVHLDCVGDVQDAIK-----ELNGRVVDGQPLKVQVSTSRVRPKPGMGDPEQCYRCG 174
                  :|||..:....|...:.     ||:|..|:.:..:.:...|...|....||....:..|
plant   167 TGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKKPNSVTTPSKRFGDSRSNFGGG 231

  Fly   175 RSGHWSKECPRLYGSAGGGREPPSPL-SAGGY---RDRMYG 211
            ....:..      |..||...|..|. |.|||   |...||
plant   232 YGDGYGG------GHGGGYGGPGGPYKSGGGYGGGRSGGYG 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	18/72 (25%)
		RRM1_2_CoAA_like	87..152	CDD:409779	20/77 (26%)
		hnRNP-R-Q	<88..>258	CDD:273732	36/141 (26%)
AT5G40490	NP_198865.1	RRM_SF	44..114	CDD:473069	17/75 (23%)
		RRM_SF	131..209	CDD:473069	20/77 (26%)