Protein Alignment lark and AT5G10350

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_196597.1
• Gene: AT5G10350 / 830899
• AraportID: AT5G10350
• Length: 217
• Species: Arabidopsis thaliana
• Alignment Length: 155
• Identity: 41/155 - (26%)
• Similarity: 58/155 - (37%)
• Gaps: 28/155 - (18%)

  Fly    65 LNEFAIKVE------------AAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDI 117
            |.|...|||            ||............::|||:.......||:..||..|||....|
plant    56 LREMQAKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120

  Fly   118 V-------RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRV----RPKPGMGDPEQCY 171
            :       :.:.:|....|..||:|: :||...:.|:.|||....:.|    :..||..:|...|
plant   121 LMDKFGQPKGFAYVEFVEVEAVQEAL-QLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNPSMGY 184

  Fly   172 RCGRSGHWSKECPRLYGSAGGGREP 196
            |..|    ....|..|...|.|:.|
plant   185 RFRR----PFVPPYFYSPYGYGKAP 205

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	3/7 (43%)
		RRM1_2_CoAA_like	87..152	CDD:409779	21/71 (30%)
		hnRNP-R-Q	<88..>258	CDD:273732	34/120 (28%)
AT5G10350	NP_196597.1	PIN_SF	<6..70	CDD:475124	5/13 (38%)
		RRM_II_PABPs	90..161	CDD:409747	21/71 (30%)