Protein Alignment lark and AT5G04600

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_196080.1
• Gene: AT5G04600 / 830337
• AraportID: AT5G04600
• Length: 222
• Species: Arabidopsis thaliana
• Alignment Length: 158
• Identity: 38/158 - (24%)
• Similarity: 61/158 - (38%)
• Gaps: 30/158 - (18%)

  Fly     9 LFIGNLDEKTQATELRALFEKYGTVVECDVVKN--------YGFVHMETEQQGRDAIQNLNGYTL 65
            |:||.:......||:.|.|.::|||....|.:|        :||:..|..:....|...:|.|.|
plant    62 LYIGRIPHGFYETEIEAFFSQFGTVKRVRVARNKKTGKSKHFGFIQFEDPEVAEIAAGAMNDYLL 126

  Fly    66 NEFAIKVEAAKSRRA-PN-----------TPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIV 118
            .|..:||...:.... ||           ..:.:|....|..:....|.|::.||   :|:.|..
plant   127 MEHMLKVHVIEPENVKPNLWRGFKCNFKPVDSVQIERRQLNKERTLEEHRKMLQK---IVKKDQK 188

  Fly   119 RNYGF----VHLDC---VGDVQDAIKEL 139
            |....    :..:|   ||:.|...|.:
plant   189 RRKRIEAAGIEYECPELVGNTQPVPKRI 216

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	21/71 (30%)
		RRM1_2_CoAA_like	87..152	CDD:409779	14/60 (23%)
		hnRNP-R-Q	<88..>258	CDD:273732	14/59 (24%)
AT5G04600	NP_196080.1	RRM_NIFK_like	61..134	CDD:409748	21/71 (30%)
		PABP-1234	80..>204	CDD:130689	28/126 (22%)