Sequence 1: | NP_523957.1 | Gene: | lark / 38811 | FlyBaseID: | FBgn0011640 | Length: | 352 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001190837.1 | Gene: | RS40 / 828654 | AraportID: | AT4G25500 | Length: | 350 | Species: | Arabidopsis thaliana |
Alignment Length: | 364 | Identity: | 96/364 - (26%) |
---|---|---|---|
Similarity: | 145/364 - (39%) | Gaps: | 67/364 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 LFIGNLDEKTQATELRALFEKYGTVVECDVVKNYGFVHMETEQQGRDAIQNLNGYTLNEFA---- 69
Fly 70 -IKVEAAKSRRAPN--------------TPTTKIFVGNL-TDKTRAPEVRELFQKYGTVVECDIV 118
Fly 119 RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKEC 183
Fly 184 PRLY----GSAGGGREPPSPLSAGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFE 244
Fly 245 DSRDLYERRYQTSRMRDFPPPPISRREPMPLPPTLSGSLRSCSVSRGYDTMFSRRSPPPPRSSNG 309
Fly 310 MSRYGSPTPHGYEDFSRDAFDERMISSRGMRGPSPPGRR 348 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lark | NP_523957.1 | RRM1_2_CoAA_like | 8..73 | CDD:409779 | 22/68 (32%) |
RRM1_2_CoAA_like | 87..152 | CDD:409779 | 17/65 (26%) | ||
hnRNP-R-Q | <88..>258 | CDD:273732 | 48/174 (28%) | ||
RS40 | NP_001190837.1 | RRM1_AtRSp31_like | 2..73 | CDD:240680 | 24/71 (34%) |
RRM_SF | 98..167 | CDD:388407 | 18/68 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1563362at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_104638 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |