Sequence 1: | NP_523957.1 | Gene: | lark / 38811 | FlyBaseID: | FBgn0011640 | Length: | 352 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_193001.2 | Gene: | AT4G12640 / 826877 | AraportID: | AT4G12640 | Length: | 823 | Species: | Arabidopsis thaliana |
Alignment Length: | 417 | Identity: | 85/417 - (20%) |
---|---|---|---|
Similarity: | 147/417 - (35%) | Gaps: | 132/417 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 LFIGNLDEKTQATELRALFEKYGTV--VECDVVKNYGFVHMETEQQGRDAIQNLNGYTLNEFAIK 71
Fly 72 VEAAKSRR-----------------------------------APNT------------PTTKIF 89
Fly 90 VG-NLTDKTRAPEVRELFQKYGTVVECDIV--RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKV 151
Fly 152 QVSTSRVRPKPGMGDPEQCYRCGRSGHWSKECPRLYGSAGGGREPP----SPL--------SAGG 204
Fly 205 Y-RDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFEDSRD---LYERRYQTSR------- 258
Fly 259 -----------MRDFPPPPISR----REPMPLPPTLSGSLRSCSVSRGYDTMFSRRSPP----PP 304
Fly 305 RSSNGMSRYGSPTPHGYEDFS-RDAFD 330 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lark | NP_523957.1 | RRM1_2_CoAA_like | 8..73 | CDD:409779 | 16/65 (25%) |
RRM1_2_CoAA_like | 87..152 | CDD:409779 | 14/67 (21%) | ||
hnRNP-R-Q | <88..>258 | CDD:273732 | 41/188 (22%) | ||
AT4G12640 | NP_193001.2 | RRM3_Spen | 25..94 | CDD:240756 | 17/68 (25%) |
RRM_SF | 153..223 | CDD:302621 | 15/71 (21%) | ||
SPOC | 471..567 | CDD:285043 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |