DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment lark and RS2Z32

DIOPT Version :9

Sequence 1:	NP_523957.1	Gene:	lark / 38811	FlyBaseID:	FBgn0011640	Length:	352	Species:	Drosophila melanogaster
Sequence 2:	NP_190918.3	Gene:	RS2Z32 / 824518	AraportID:	AT3G53500	Length:	284	Species:	Arabidopsis thaliana

Alignment Length:	309	Identity:	85/309 - (27%)
Similarity:	115/309 - (37%)	Gaps:	87/309 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    86 TKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIKELNGRVVDGQPLK 150
            |:::||.|:.:||..::..||.:||.|.:.|:.|:|.||......|..||...|:||..||..:.
plant    11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYYLDGRDFDGSRIT 75

  Fly   151 VQVSTSRVR---------PKPGMGDPEQCYRCGRSGHWSKECP------RLYGSAGGG------R 194
            |:.|....|         |.||.|   :|:.||..|||:::|.      :.|.....|      :
plant    76 VEASRGAPRGSRDNGSRGPPPGSG---RCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCK 137

  Fly   195 EPPSPLSA--GGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFEDSRD-LYERRYQT 256
            ..|||..|  ||    .|.|.|.....|                   .||...||. .|.|....
plant   138 NSPSPKKARQGG----SYSRSPVKSRSP-------------------RRRRSPSRSRSYSRGRSY 179

  Fly   257 SRMRDFPPPPISR--------REPMPLPPTLSGSLRSCSVS-----------RGYDTMFSRRSPP 302
            ||.|.    |:.|        |.|..:..::|...|..|:|           ||.|...|
plant   180 SRSRS----PVRREKSVEDRSRSPKAMERSVSPKGRDQSLSPDRKVIDASPKRGSDYDGS----- 235

  Fly   303 PPRSSNGMSRY-----GSPTPHGYEDFSRDAFDERMISSRGMRGPSPPG 346
            |..:.||.:..     |..:|.|.....|...|:....||    |||.|
plant   236 PKENGNGRNSASPIVGGGESPVGLNGQDRSPIDDEAELSR----PSPKG 280

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779
		RRM1_2_CoAA_like	87..152	CDD:409779	23/64 (36%)
		hnRNP-R-Q	<88..>258	CDD:273732	55/193 (28%)
RS2Z32	NP_190918.3	RRM_SF	12..81	CDD:388407	25/68 (37%)
RS2Z32	NP_190918.3	PTZ00368	<86..142	CDD:173561	14/58 (24%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910