Protein Alignment lark and RS2Z32

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_190918.3
• Gene: RS2Z32 / 824518
• AraportID: AT3G53500
• Length: 284
• Species: Arabidopsis thaliana
• Alignment Length: 309
• Identity: 85/309 - (27%)
• Similarity: 115/309 - (37%)
• Gaps: 87/309 - (28%)

  Fly    86 TKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIKELNGRVVDGQPLK 150
            |:::||.|:.:||..::..||.:||.|.:.|:.|:|.||......|..||...|:||..||..:.
plant    11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFSDPRDADDARYYLDGRDFDGSRIT 75

  Fly   151 VQVSTSRVR---------PKPGMGDPEQCYRCGRSGHWSKECP------RLYGSAGGG------R 194
            |:.|....|         |.||.|   :|:.||..|||:::|.      :.|.....|      :
plant    76 VEASRGAPRGSRDNGSRGPPPGSG---RCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCK 137

  Fly   195 EPPSPLSA--GGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFEDSRD-LYERRYQT 256
            ..|||..|  ||    .|.|.|.....|                   .||...||. .|.|....
plant   138 NSPSPKKARQGG----SYSRSPVKSRSP-------------------RRRRSPSRSRSYSRGRSY 179

  Fly   257 SRMRDFPPPPISR--------REPMPLPPTLSGSLRSCSVS-----------RGYDTMFSRRSPP 302
            ||.|.    |:.|        |.|..:..::|...|..|:|           ||.|...|
plant   180 SRSRS----PVRREKSVEDRSRSPKAMERSVSPKGRDQSLSPDRKVIDASPKRGSDYDGS----- 235

  Fly   303 PPRSSNGMSRY-----GSPTPHGYEDFSRDAFDERMISSRGMRGPSPPG 346
            |..:.||.:..     |..:|.|.....|...|:....||    |||.|
plant   236 PKENGNGRNSASPIVGGGESPVGLNGQDRSPIDDEAELSR----PSPKG 280

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779
		RRM1_2_CoAA_like	87..152	CDD:409779	23/64 (36%)
		hnRNP-R-Q	<88..>258	CDD:273732	55/193 (28%)
RS2Z32	NP_190918.3	RRM_SF	12..81	CDD:473069	25/68 (37%)
		PTZ00368	<86..142	CDD:173561	14/58 (24%)