Protein Alignment lark and U1-70K

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_190636.1
• Gene: U1-70K / 824230
• AraportID: AT3G50670
• Length: 427
• Species: Arabidopsis thaliana
• Alignment Length: 273
• Identity: 63/273 - (23%)
• Similarity: 92/273 - (33%)
• Gaps: 81/273 - (29%)

  Fly    47 METEQQGRDAIQNLNGYTLNEFAIKVEAAKSRRAPNT-------PTTKIFVGNLTDKTRAPEVRE 104
            :|...|.|:.|..|.   |.:...|......:..||.       |...:||..|..::...:::.
plant    95 VELPSQKRERIHKLR---LEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKR 156

  Fly   105 LFQKYGTVVECDIV--------RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRVRP- 160
            .|:.||.:....:|        :.|.|:......|::.|.|:.:|:.:||:.:.|.|...|..|
plant   157 EFESYGPIKRVHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTVPN 221

  Fly   161 -KP-----GMG-------------------------------DPEQCYRCG----RSGHWSKECP 184
             :|     |:|                               :.|:....|    ||...|.|.|
plant   222 WRPRRLGGGLGTSRVGGGEEIVGEQQPQGRTSQSEEPSRPREEREKSREKGKERERSRELSHEQP 286

  Fly   185 RLYGSAGGGREPPSPLSAGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYD-YYDRRFEDSRD 248
            |       .|....|.....:|||..|.             |||..|..||.| ..||...|.||
plant   287 R-------ERSRDRPREDKHHRDRDQGG-------------RDRDRDSRRDRDRTRDRGDRDRRD 331

  Fly   249 LYERRYQTSRMRD 261
            ....|.:|||..|
plant   332 RDRGRDRTSRDHD 344

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	7/25 (28%)
		RRM1_2_CoAA_like	87..152	CDD:409779	15/72 (21%)
		hnRNP-R-Q	<88..>258	CDD:273732	50/220 (23%)
U1-70K	NP_190636.1	U1snRNP70_N	40..129	CDD:432406	9/36 (25%)
		RRM_snRNP70	137..227	CDD:409682	20/89 (22%)
		PRK12678	245..>395	CDD:237171	31/120 (26%)