DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment lark and SR34a

DIOPT Version :9

Sequence 1:	NP_523957.1	Gene:	lark / 38811	FlyBaseID:	FBgn0011640	Length:	352	Species:	Drosophila melanogaster
Sequence 2:	NP_001190041.1	Gene:	SR34a / 824105	AraportID:	AT3G49430	Length:	300	Species:	Arabidopsis thaliana

Alignment Length:	316	Identity:	80/316 - (25%)
Similarity:	112/316 - (35%)	Gaps:	105/316 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly    88 IFVGNLTDKTRAPEVRELFQKYGTVVECDI-----VRNYGFVHLDCVGDVQDAIKELNGRVVDGQ 147
            |:||||....|..|:.::|.|||.:|:.::     ...|.||..:...|.:||||..:|..:||.
plant     9 IYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGRDGYNLDGC 73

  Fly   148 PLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKECPRLYGSAGGG------------------R 194
            .|:|:::..      |.|......|.|..|..|.     ||..|||                  |
plant    74 RLRVELAHG------GRGQSSSDRRGGYGGGGSG-----YGGGGGGGGSARFGVSRHSEFRVIVR 127

  Fly   195 EPPSPLSAGGYRDRM------------------YGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDR 241
            ..||..|....:|.|                  ||...|               ..:.|..|..|
plant   128 GLPSSASWQDLKDHMRKAGDVCFAEVTRDSDGTYGVVDY---------------TNYDDMKYAIR 177

  Fly   242 RFEDS--RDLYER------RYQTSRMRDFPPPPISRREPMPLPPTLSGSLRSCSVSRGYDTMFSR 298
            :.:|:  |:.:.|      :|::||.|...|.....|.            ||.|.|||.....||
plant   178 KLDDTEFRNPWARGFIRVKKYESSRSRSRSPSRSRSRS------------RSRSRSRGRGRSHSR 230

  Fly   299 RSPPPPRSSNGMSRYGSPTPHGYEDFSRDAFDERMISSRGM---RGPSPPGRRYAP 351
                    |..:||..||.    :|.|:   ..|...||.:   |.|||..::..|
plant   231 --------SRSLSRSKSPR----KDLSK---SPRRSLSRSISKSRSPSPDKKKSPP 271

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779
		RRM1_2_CoAA_like	87..152	CDD:409779	24/68 (35%)
		hnRNP-R-Q	<88..>258	CDD:273732	52/218 (24%)
SR34a	NP_001190041.1	RRM_SF	9..79	CDD:418427	25/69 (36%)
SR34a	NP_001190041.1	RRM2_SF2_plant_like	122..197	CDD:410014	15/89 (17%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23147
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.010