Protein Alignment lark and NUC-L2

DIOPT Version :9

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_188491.1
• Gene: NUC-L2 / 821392
• AraportID: AT3G18610
• Length: 636
• Species: Arabidopsis thaliana
• Alignment Length: 253
• Identity: 57/253 - (22%)
• Similarity: 97/253 - (38%)
• Gaps: 55/253 - (21%)

  Fly     5 GTFKLFIGNLDEKTQATELRALFEKYGTVVECDV-------VKNYGFVHMETEQQGRDAIQNLNG 62
            |:..||.|||..:...:::...|::.|.||:..:       .|.||.:...:.::.:.|:: :||
plant   382 GSKTLFAGNLSYQIARSDIENFFKEAGEVVDVRLSSFDDGSFKGYGHIEFASPEEAQKALE-MNG 445

  Fly    63 YTLNEFAIKVEAAKSRRAP--------------NTPTTKIFVGNLTDKTRAPEVRELFQKYGTVV 113
            ..|....::::.|..|..|              .|...:.|..:|.:.....|:|..|.|.|.|.
plant   446 KLLLGRDVRLDLANERGTPRNSNPGRKGEGSQSRTIYVRGFSSSLGEDEIKKELRSHFSKCGEVT 510

  Fly   114 ECDIV------RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRVRPK----------- 161
            ...:.      .:.||.::|......:|: :|:|..:.|..:.|:.|    ||:
plant   511 RVHVPTDRETGASRGFAYIDLTSGFDEAL-QLSGSEIGGGNIHVEES----RPRDSDEGRSSNRA 570

  Fly   162 PGMGDPEQCY--RCGRSGHWSKECPRLYGSAGGGREPPSPLSAGGYRDRMYGRDPYPP 217
            |..|.|...:  |..|.|.:|...||       ||........|.:..|  ||.|..|
plant   571 PARGAPRGRHSDRAPRGGRFSDRAPR-------GRHSDRGAPRGRFSTR--GRGPSKP 619

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	16/71 (23%)
		RRM1_2_CoAA_like	87..152	CDD:409779	15/70 (21%)
		hnRNP-R-Q	<88..>258	CDD:273732	36/149 (24%)
NUC-L2	NP_188491.1	RRM1_NUCLs	385..461	CDD:409884	17/76 (22%)
		RRM2_NUCLs	480..556	CDD:409885	17/76 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910