Protein Alignment lark and AT3G14100

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_188026.1
• Gene: AT3G14100 / 820626
• AraportID: AT3G14100
• Length: 427
• Species: Arabidopsis thaliana
• Alignment Length: 378
• Identity: 85/378 - (22%)
• Similarity: 142/378 - (37%)
• Gaps: 104/378 - (27%)

  Fly     9 LFIGNLDEKTQATE--LRALFEKYGTVVECDVVK----NYGFVHMETEQQGRDAIQNLNGYTLNE 67
            :::||:  .||.||  |:.:|...|.|....:::    :|||||....:....||.:|||..|..
plant    61 VYVGNI--HTQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFG 123

  Fly    68 FAIKVE--AAKSRRAPNTPTTKIFVGNLTDKTRAPEVRE--LFQKYGTVVECDIV---------- 118
            ..|||.  .|..:|...:....||||:|     :|||.:  |:|.:.....|...
plant   124 QPIKVNWAYATGQREDTSSHFNIFVGDL-----SPEVTDATLYQSFSVFSSCSDARVMWDQKTGR 183

  Fly   119 -RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKE 182
             |.:|||......|.|.||.|:||:.:..:.::...:|     |......::....|:|     .
plant   184 SRGFGFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWAT-----KGATSGDDKLSSDGKS-----V 238

  Fly   183 CPRLYGSAGGGRE------PPS--------------------------PLSAG------GYRDRM 209
            .....||:..|:|      |.:                          .|.||      ..||:.
plant   239 VELTTGSSEDGKETLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKG 303

  Fly   210 YGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFEDSRDLYERRYQTSRMRDFPPPPISRREPMP 274
            :|...|...|.....::   |...:.|            |:.|:.:.| ..:.|.||.:...|:|
plant   304 FGFVRYNTHPEAALAIQ---MGNTQPY------------LFNRQIKCS-WGNKPTPPGTASNPLP 352

  Fly   275 LP-----PTLSGS-----LRSCSVSR--GYDTMFSRRSPPPPRSSNGMSRYGS 315
            .|     |.||.:     .|..::|:  ..:.:..::...|.|.::|::..|:
plant   353 PPAPAPVPGLSAADLLNYERQLALSKMASVNALMHQQGQHPLRQAHGINAAGA 405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	23/69 (33%)
		RRM1_2_CoAA_like	87..152	CDD:409779	22/77 (29%)
		hnRNP-R-Q	<88..>258	CDD:273732	43/220 (20%)
AT3G14100	NP_188026.1	RRM1_PUB1	61..131	CDD:410026	24/71 (34%)
		RRM2_PUB1	143..222	CDD:410031	23/88 (26%)
		RRM_SF	265..341	CDD:473069	13/91 (14%)