Protein Alignment lark and RS31a

DIOPT Version :9

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_182184.1
• Gene: RS31a / 819273
• AraportID: AT2G46610
• Length: 250
• Species: Arabidopsis thaliana
• Alignment Length: 320
• Identity: 80/320 - (25%)
• Similarity: 118/320 - (36%)
• Gaps: 92/320 - (28%)

  Fly     9 LFIGNLDEKTQATELRALFEKYGTVVECDVVKNYGFVHMETEQQGRDAIQNLNGYTL--NEFAIK 71
            :::||.|..|:.::|..||.|:|.|...|:...|.||:.|.|:...|||:..:..|.  ....:.
plant     4 VYVGNFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTFGYGRRKLS 68

  Fly    72 VEAAK----SRRAP--------NTPTTKIFVGNLTD-KTRAPEVRELFQKYGTVVECDIVRNYGF 123
            ||.||    .|..|        ..||..:||.|... :||..::...|:.||.|:...:.||:.|
plant    69 VEWAKDFQGERGKPRDGKAVSNQRPTKTLFVINFDPIRTRERDMERHFEPYGKVLNVRMRRNFAF 133

  Fly   124 VHLDCVGDVQDAIKEL----NGRVVDGQPLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKECP 184
            |..   ...:||.|.|    |.:::| :.:.|:.:....      |:.|..|...|.
plant   134 VQF---ATQEDATKALDSTHNSKLLD-KVVSVEYALREA------GEREDRYAGSRR-------- 180

  Fly   185 RLYGSAGGGREPPSPLSAGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFEDSRDL 249
                     |..|||:    ||.|           |.|.:.|.|    ..:||.|.
plant   181 ---------RRSPSPV----YRRR-----------PSPDYTRRR----SPEYDRYK--------- 208

  Fly   250 YERRYQTSRMRDFPPPPISRREPMPLPPTLSGSLRSCSVSRGYDTMFSRRSPPPPRSSNG 309
                         .|.|..||:........|...|:.:.|.|||     ||..|.:.:.|
plant   209 -------------GPAPYERRKSPDYGRRSSDYGRARARSPGYD-----RSRSPIQRARG 250

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	20/65 (31%)
		RRM1_2_CoAA_like	87..152	CDD:409779	19/69 (28%)
		hnRNP-R-Q	<88..>258	CDD:273732	38/174 (22%)
RS31a	NP_182184.1	RRM_SF	2..73	CDD:302621	22/68 (32%)
		RRM_SF	96..165	CDD:302621	20/72 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1563362at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_104638
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820