Protein Alignment lark and AT2G43370

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_850395.1
• Gene: AT2G43370 / 818938
• AraportID: AT2G43370
• Length: 333
• Species: Arabidopsis thaliana
• Alignment Length: 310
• Identity: 73/310 - (23%)
• Similarity: 111/310 - (35%)
• Gaps: 99/310 - (31%)

  Fly    79 RAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRN--------YGFVHLDCVGDVQDA 135
            :|...|...:|||.|:..|....:||:..|||.:....:||:        ||||..:...::..|
plant    57 KAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNLRLVRHIVTGASRGYGFVEYETEKEMLRA 121

  Fly   136 IKELNGRVVDGQPLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKECPRLYGSAGGGREPPSPL 200
            .::.:..::||:  ::.|..:|.:..||               |   .||..|...|||:....|
plant   122 YEDAHHSLIDGR--EIIVDYNRQQLMPG---------------W---IPRRLGGGLGGRKESGQL 166

  Fly   201 SAGGYRDRMYGRDPYPP-------------PP----------PPPPFLRDRIMDGFRDYDYY--- 239
            ..|| |||.: |.|..|             ||          |.||..:..:.|  |:.:||
plant   167 RFGG-RDRPF-RAPLRPIPHEDLKKLGIQLPPEGRYMSRTQIPSPPRRKGSVSD--REEEYYREK 227

  Fly   240 -----DRRFEDSRDLYERRYQTSRMRDFPPPPISRREPMPLPPTLSGSLRSCS----------VS 289
                 :..|::...|  |.|.:.|..........||         |.....||          .:
plant   228 SSVEREEEFKERSSL--RSYHSHRSSAHTHSSHRRR---------SKDREECSREESRSDRKERA 281

  Fly   290 RGYDTMF---------SRRSPPPPRSSNGMSRYGS---PTPHGYEDFSRD 327
            ||.:..:         |:||   .||....||...   |:.|....:|:|
plant   282 RGMEDRYGDNKGEVSGSKRS---KRSEEDRSRKRHKHLPSHHHRRSYSQD 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779
		RRM1_2_CoAA_like	87..152	CDD:409779	19/72 (26%)
		hnRNP-R-Q	<88..>258	CDD:273732	52/208 (25%)
AT2G43370	NP_850395.1	RRM_snRNP35	60..150	CDD:409683	25/109 (23%)
		U2AF_lg	218..>324	CDD:273727	25/121 (21%)