Protein Alignment lark and RS2Z33

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_850280.1
• Gene: RS2Z33 / 818311
• AraportID: AT2G37340
• Length: 290
• Species: Arabidopsis thaliana
• Alignment Length: 312
• Identity: 80/312 - (25%)
• Similarity: 110/312 - (35%)
• Gaps: 87/312 - (27%)

  Fly    86 TKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIKELNGRVVDGQPLK 150
            |:::||.|:.:||..::..||.:||.|.:.|:.|:|.||......|..||...|:||..||..:.
plant    11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDARHYLDGRDFDGSRIT 75

  Fly   151 VQVSTSRVR---------PKPGMGDPEQCYRCGRSGHWSKECP------RLYGSAGGG------R 194
            |:.|....|         |.||.|   :|:.||..|||:::|.      :.|.....|      :
plant    76 VEFSRGAPRGSRDFDSRGPPPGAG---RCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCK 137

  Fly   195 EPPSPLSAGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFEDSRDL-YERRYQTSR 258
            ..|..|...|    .|.|.|.....|                   .||...||.| ..|.|..||
plant   138 NSPKKLRRSG----SYSRSPVRSRSP-------------------RRRRSPSRSLSRSRSYSRSR 179

  Fly   259 MRDFPPPPISRRE---------PMPLPPTLSGSLRSCSV---SRGYDTMFSRRSPPPPR------ 305
                  .|:.|||         |..:..:||...|..|.   ..|...:.....||.|:
plant   180 ------SPVRRRERSVEERSRSPKRMDDSLSPRARDRSPVLDDEGSPKIIDGSPPPSPKLQKEVG 238

  Fly   306 --------SSNGMSRYGSPTPHGYEDFSR-------DAFDERMISSRGMRGP 342
                    ..||.:...||......|.|:       |.::....|.||...|
plant   239 SDRDGGSPQDNGRNSVVSPVVGAGGDSSKEDRSPVDDDYEPNRTSPRGSESP 290

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779
		RRM1_2_CoAA_like	87..152	CDD:409779	23/64 (36%)
		hnRNP-R-Q	<88..>258	CDD:273732	53/191 (28%)
RS2Z33	NP_850280.1	RRM_SF	12..81	CDD:473069	25/68 (37%)
		PTZ00368	<86..144	CDD:173561	14/60 (23%)