DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment lark and RS2Z33

DIOPT Version :9

Sequence 1:	NP_523957.1	Gene:	lark / 38811	FlyBaseID:	FBgn0011640	Length:	352	Species:	Drosophila melanogaster
Sequence 2:	NP_850280.1	Gene:	RS2Z33 / 818311	AraportID:	AT2G37340	Length:	290	Species:	Arabidopsis thaliana

Alignment Length:	312	Identity:	80/312 - (25%)
Similarity:	110/312 - (35%)	Gaps:	87/312 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    86 TKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIKELNGRVVDGQPLK 150
            |:::||.|:.:||..::..||.:||.|.:.|:.|:|.||......|..||...|:||..||..:.
plant    11 TRLYVGRLSSRTRTRDLERLFSRYGRVRDVDMKRDYAFVEFGDPRDADDARHYLDGRDFDGSRIT 75

  Fly   151 VQVSTSRVR---------PKPGMGDPEQCYRCGRSGHWSKECP------RLYGSAGGG------R 194
            |:.|....|         |.||.|   :|:.||..|||:::|.      :.|.....|      :
plant    76 VEFSRGAPRGSRDFDSRGPPPGAG---RCFNCGVDGHWARDCTAGDWKNKCYRCGERGHIERNCK 137

  Fly   195 EPPSPLSAGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFEDSRDL-YERRYQTSR 258
            ..|..|...|    .|.|.|.....|                   .||...||.| ..|.|..||
plant   138 NSPKKLRRSG----SYSRSPVRSRSP-------------------RRRRSPSRSLSRSRSYSRSR 179

  Fly   259 MRDFPPPPISRRE---------PMPLPPTLSGSLRSCSV---SRGYDTMFSRRSPPPPR------ 305
                  .|:.|||         |..:..:||...|..|.   ..|...:.....||.|:
plant   180 ------SPVRRRERSVEERSRSPKRMDDSLSPRARDRSPVLDDEGSPKIIDGSPPPSPKLQKEVG 238

  Fly   306 --------SSNGMSRYGSPTPHGYEDFSR-------DAFDERMISSRGMRGP 342
                    ..||.:...||......|.|:       |.::....|.||...|
plant   239 SDRDGGSPQDNGRNSVVSPVVGAGGDSSKEDRSPVDDDYEPNRTSPRGSESP 290

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779
		RRM1_2_CoAA_like	87..152	CDD:409779	23/64 (36%)
		hnRNP-R-Q	<88..>258	CDD:273732	53/191 (28%)
RS2Z33	NP_850280.1	RRM_SF	12..81	CDD:418427	25/68 (37%)
		PTZ00368	<86..144	CDD:173561	14/60 (23%)
		MSCRAMM_ClfB	<209..>289	CDD:411414	15/79 (19%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910