Protein Alignment lark and hnrnpa3

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_001315077.1
• Gene: hnrnpa3 / 751729
• ZFINID: ZDB-GENE-060224-1
• Length: 340
• Species: Danio rerio
• Alignment Length: 272
• Identity: 72/272 - (26%)
• Similarity: 106/272 - (38%)
• Gaps: 54/272 - (19%)

  Fly     8 KLFIGNLDEKTQATELRALFEKYGTVVECDVVKN--------YGFVHMETEQQGRDAIQNLNGYT 64
            |||||.|..:|....|||.||::|.:.:|.|:::        :|||...:..: .||......:.
Zfish    14 KLFIGGLSFETTEDSLRAHFEQWGKLTDCVVMRDPANKRSRGFGFVTYSSVSE-VDAAMTARPHK 77

  Fly    65 LNEFAIKVEAAKSRRAPNTP-----TTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIV------ 118
            ::...::.:.|.||...|.|     ..|||||.:.:.|....:||.|:.||.:...||:
Zfish    78 VDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYFECYGKIETIDIMEERSTG 142

  Fly   119 --RNYGFVHLD-------CVGDVQDAIKELNGRVVDGQPLKVQVSTSRVRPKPGMGDPEQCYRCG 174
              |.:.||..|       .|......|...|..|....|.:...|:|..|.:.|.|.    ...|
Zfish   143 KKRGFCFVTFDDHDTVDKIVAQKYHTINSHNCEVRKALPKQEMQSSSNQRYRGGGGG----NFTG 203

  Fly   175 RSGHWSKECPRLYGSAGGGREPPSPLSA---------GGYRDRMYGRDPYPPPPPPPPFLRDRIM 230
            |.|::.:      |..||||......:.         |||..   ||..|   ...|.:......
Zfish   204 RGGNFGR------GGYGGGRGGGDGYNGFGGNYGGGPGGYGG---GRGGY---GGGPGYGNQGGG 256

  Fly   231 DGFRDYDYYDRR 242
            .||..:|.|:.|
Zfish   257 GGFGGFDNYNDR 268

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	20/72 (28%)
		RRM1_2_CoAA_like	87..152	CDD:409779	22/79 (28%)
		hnRNP-R-Q	<88..>258	CDD:273732	46/179 (26%)
hnrnpa3	NP_001315077.1	RRM1_hnRNPA_like	14..91	CDD:409992	21/77 (27%)
		RRM2_hnRNPA3	104..183	CDD:409996	22/78 (28%)
		HnRNPA1	292..>315	CDD:463312