| Sequence 1: | NP_523957.1 | Gene: | lark / 38811 | FlyBaseID: | FBgn0011640 | Length: | 352 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_079993.2 | Gene: | Rbm4b / 66704 | MGIID: | 1913954 | Length: | 357 | Species: | Mus musculus |
| Alignment Length: | 347 | Identity: | 115/347 - (33%) |
|---|---|---|---|
| Similarity: | 166/347 - (47%) | Gaps: | 75/347 - (21%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 8 KLFIGNLDEKTQATELRALFEKYGTVVECDVVKNYGFVHMETEQQGRDAIQNLNGYTLNEFAIKV 72
Fly 73 EAAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIK 137
Fly 138 ELNGRVVDGQPLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKECP-----------RLYGSAG 191
Fly 192 GGREPPSPLSAGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFEDSRDLYERRYQT 256
Fly 257 SRMRDFPPPPISRREPMPLPPTLSGSLRSCSVSRGYDTMFSRRSPPPPRSSNGMSRYGSPTPHGY 321
Fly 322 EDFSRDAFDERMISSRGMRGPS 343 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| lark | NP_523957.1 | RRM1_2_CoAA_like | 8..73 | CDD:409779 | 34/64 (53%) |
| RRM1_2_CoAA_like | 87..152 | CDD:409779 | 24/64 (38%) | ||
| hnRNP-R-Q | <88..>258 | CDD:273732 | 62/180 (34%) | ||
| Rbm4b | NP_079993.2 | RRM1_RBM4 | 2..68 | CDD:241050 | 34/64 (53%) |
| RRM2_RBM4 | 78..144 | CDD:241051 | 25/65 (38%) | ||
| PTZ00368 | <145..>181 | CDD:173561 | 23/35 (66%) | ||
| ZnF_C2HC | 161..176 | CDD:197667 | 11/14 (79%) | ||
| Interaction with TNPO3. /evidence=ECO:0000250 | 196..357 | 25/151 (17%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 74 | 1.000 | Domainoid score | I9095 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0109 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 191 | 1.000 | Inparanoid score | I3862 |
| Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S3124 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1563362at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002310 | |
| OrthoInspector | 1 | 1.000 | - | - | otm42527 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_104638 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR23147 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4630 |
| SonicParanoid | 1 | 1.000 | - | - | X1736 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 14 | 13.810 | |||||