Protein Alignment lark and PABPC1L2B

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: NP_001035971.1
• Gene: PABPC1L2B / 645974
• HGNCID: 31852
• Length: 200
• Species: Homo sapiens
• Alignment Length: 105
• Identity: 30/105 - (28%)
• Similarity: 42/105 - (40%)
• Gaps: 25/105 - (23%)

  Fly     4 AGTFKLFIGNLDEKTQATELRALFEKYGTVVECDVV------KNYGFVHMETEQQGRDAIQNLNG 62
            :|...:||.||.:......|..:|..:|.::.|.|.      |.|||||.:.::....||..:||
Human    87 SGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNG 151

  Fly    63 YTLNEFAIKVEAAKSRRAPNTPTTKIFVGNL-TDKTRAPE 101
            ..||                  ..|||||.. :.|.|..|
Human   152 MFLN------------------YRKIFVGRFKSHKEREAE 173

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	21/70 (30%)
		RRM1_2_CoAA_like	87..152	CDD:409779	8/16 (50%)
		hnRNP-R-Q	<88..>258	CDD:273732	7/15 (47%)
PABPC1L2B	NP_001035971.1	PABP-1234	2..>196	CDD:130689	30/105 (29%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	170..200		2/4 (50%)