Protein Alignment lark and elavl3

DIOPT Version :10

• Sequence 1: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Sequence 2: XP_012808614.1
• Gene: elavl3 / 594912
• XenbaseID: XB-GENE-490864
• Length: 363
• Species: Xenopus tropicalis
• Alignment Length: 167
• Identity: 44/167 - (26%)
• Similarity: 74/167 - (44%)
• Gaps: 20/167 - (11%)

  Fly     9 LFIGNLDEKTQATELRALFEKYGTVVECDVVKN--------YGFVHMETEQQGRDAIQNLNGYTL 65
            |.:..|.:.....|.::||...|.:..|.:|::        ||||:.........||..|||..|
 Frog    37 LIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKL 101

  Fly    66 NEFAIKVEAAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIV---------RNY 121
            ....|||..|:...| :.....::|.:|.......|:.:||.:||.::...|:         |..
 Frog   102 QTKTIKVSYARPSSA-SIRDANLYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGSVSRGV 165

  Fly   122 GFVHLDCVGDVQDAIKELNGRVVDG--QPLKVQVSTS 156
            ||:..|...:.::|||.|||:...|  :|:.|:.:.:
 Frog   166 GFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANN 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	20/71 (28%)
		RRM1_2_CoAA_like	87..152	CDD:409779	20/75 (27%)
		hnRNP-R-Q	<88..>258	CDD:273732	21/80 (26%)
elavl3	XP_012808614.1	ELAV_HUD_SF	32..362	CDD:273741	44/167 (26%)