DRSC/TRiP Functional Genomics Resources

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Protein Alignment lark and RBMS1

DIOPT Version :10

Sequence 1:NP_523957.1 Gene:lark / 38811 FlyBaseID:FBgn0011640 Length:352 Species:Drosophila melanogaster
Sequence 2:XP_047301324.1 Gene:RBMS1 / 5937 HGNCID:9907 Length:422 Species:Homo sapiens


Alignment Length:18 Identity:8/18 - (44%)
Similarity:9/18 - (50%) Gaps:0/18 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LPLGDLSFPNLLMKFGGF 70
            |.|||..|...|:...||
Human   361 LGLGDSCFNTQLLSILGF 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
larkNP_523957.1 RRM1_2_CoAA_like 8..73 CDD:409779 8/18 (44%)
RRM1_2_CoAA_like 87..152 CDD:409779
hnRNP-R-Q <88..>258 CDD:273732
RBMS1XP_047301324.1 RRM1_MSSP1 55..140 CDD:409900
RRM2_MSSP1 141..225 CDD:409903
Blue background indicates that the domain is not in the aligned region.

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