| Sequence 1: | NP_523957.1 | Gene: | lark / 38811 | FlyBaseID: | FBgn0011640 | Length: | 352 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_002887.2 | Gene: | RBM4 / 5936 | HGNCID: | 9901 | Length: | 364 | Species: | Homo sapiens |
| Alignment Length: | 368 | Identity: | 123/368 - (33%) |
|---|---|---|---|
| Similarity: | 173/368 - (47%) | Gaps: | 82/368 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 8 KLFIGNLDEKTQATELRALFEKYGTVVECDVVKNYGFVHMETEQQGRDAIQNLNGYTLNEFAIKV 72
Fly 73 EAAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIK 137
Fly 138 ELNGRVVDGQPLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKECP-----------RLYGSAG 191
Fly 192 GGREPPSPLSAGG--YRDRMYGR-DPYPPPPPPPPFLRDRIMDGFRD--------YDYYDRRFED 245
Fly 246 ----------------SRDLYERRY-----------------------QTSRM-RDFPPPPISRR 270
Fly 271 EPMPLPPTLSGSLRSCSVSRGYDTMFSRRSPPPPRSSNGMSRY 313 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| lark | NP_523957.1 | RRM1_2_CoAA_like | 8..73 | CDD:409779 | 34/64 (53%) |
| RRM1_2_CoAA_like | 87..152 | CDD:409779 | 24/64 (38%) | ||
| hnRNP-R-Q | <88..>258 | CDD:273732 | 67/230 (29%) | ||
| RBM4 | NP_002887.2 | RRM1_RBM4 | 2..68 | CDD:410018 | 34/64 (53%) |
| RRM2_RBM4 | 78..144 | CDD:410019 | 25/65 (38%) | ||
| PTZ00368 | <145..>181 | CDD:173561 | 23/35 (66%) | ||
| ZnF_C2HC | 161..176 | CDD:197667 | 11/14 (79%) | ||
| Interaction with TNPO3. /evidence=ECO:0000269|PubMed:12628928 | 196..364 | 33/172 (19%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 74 | 1.000 | Domainoid score | I9137 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 191 | 1.000 | Inparanoid score | I3876 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1563362at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002310 | |
| OrthoInspector | 1 | 1.000 | - | - | otm40448 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_104638 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR23147 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X1736 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 11 | 10.930 | |||||