Sequence 1: | NP_523957.1 | Gene: | lark / 38811 | FlyBaseID: | FBgn0011640 | Length: | 352 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001356237.1 | Gene: | Srsf4 / 57317 | MGIID: | 1890577 | Length: | 496 | Species: | Mus musculus |
Alignment Length: | 353 | Identity: | 78/353 - (22%) |
---|---|---|---|
Similarity: | 119/353 - (33%) | Gaps: | 105/353 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 GTVVECDVVKNYGFVHMETEQQGRDAIQNLNGYTLNEFAIKVEAAKSRR---------------- 79
Fly 80 ------APNTPTT-KIFVGNLTDKTRAPEVRELFQKYGTVVECDI---VRNYGFVHLDCVGDVQD 134
Fly 135 AIKELNGRVVDGQPLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKECPRLYGSAGGGREPPSP 199
Fly 200 LSAGGYRDRMYGRDPYPPPPPPPPFLRDRIMDGFRDYDYYDRRFEDSRDLYERRYQTSRMRDFPP 264
Fly 265 PPISRREPMPLPPTLSGSLRSCSVSRGYDTMFSRRSPPPPRS--------------SNGMSRYGS 315
Fly 316 PTPHGYEDFSRDAFDERMISSRGMRGPS 343 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lark | NP_523957.1 | RRM1_2_CoAA_like | 8..73 | CDD:409779 | 14/41 (34%) |
RRM1_2_CoAA_like | 87..152 | CDD:409779 | 14/67 (21%) | ||
hnRNP-R-Q | <88..>258 | CDD:273732 | 33/172 (19%) | ||
Srsf4 | NP_001356237.1 | RRM_SF | <42..77 | CDD:388407 | 13/34 (38%) |
RRM2_SRSF4_like | 109..180 | CDD:241044 | 15/76 (20%) | ||
U2AF_lg | 250..>361 | CDD:273727 | 20/87 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |