Sequence 1: | NP_523957.1 | Gene: | lark / 38811 | FlyBaseID: | FBgn0011640 | Length: | 352 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_955999.1 | Gene: | rbm4.1 / 573001 | ZFINID: | ZDB-GENE-030131-3902 | Length: | 419 | Species: | Danio rerio |
Alignment Length: | 441 | Identity: | 140/441 - (31%) |
---|---|---|---|
Similarity: | 189/441 - (42%) | Gaps: | 145/441 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 KLFIGNLDEKTQATELRALFEKYGTVVECDVVKNYGFVHMETEQQGRDAIQNLNGYTLNEFAIKV 72
Fly 73 EAAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRNYGFVHLDCVGDVQDAIK 137
Fly 138 ELNGRVVDGQPLKVQVSTSRVRPKPGMGDPEQCYRCGRSGHWSKECPRLYGSAGGGREPPS---- 198
Fly 199 ----------------------PLSAG------------GYRDRMYGRD---------------- 213
Fly 214 ----------------------PYPPPPPPPPFLR----DRIMDGFRDYDYYDR---------RF 243
Fly 244 EDSRDLYERRYQTSRMRDFPPPPIS----------------RREPMPLPPTLSGSL--------- 283
Fly 284 RSCSVSRGYDTMFSRRSPPP--PRSSNGMSRYGSPTPHGYEDFSRDAFDER 332 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lark | NP_523957.1 | RRM1_2_CoAA_like | 8..73 | CDD:409779 | 33/64 (52%) |
RRM1_2_CoAA_like | 87..152 | CDD:409779 | 26/64 (41%) | ||
hnRNP-R-Q | <88..>258 | CDD:273732 | 74/258 (29%) | ||
rbm4.1 | NP_955999.1 | RRM1_RBM4 | 2..68 | CDD:241050 | 33/64 (52%) |
RRM2_RBM4 | 78..144 | CDD:241051 | 27/65 (42%) | ||
ZnF_C2HC | 161..176 | CDD:197667 | 11/14 (79%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 322..341 | 7/27 (26%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 349..371 | 6/21 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 76 | 1.000 | Domainoid score | I8906 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0109 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 204 | 1.000 | Inparanoid score | I3706 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1563362at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002310 | |
OrthoInspector | 1 | 1.000 | - | - | otm25261 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104638 | |
Panther | 1 | 1.100 | - | - | O | PTHR23147 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4630 |
SonicParanoid | 1 | 1.000 | - | - | X1736 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.860 |