DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment lark and srsf7b

DIOPT Version :9

Sequence 1:	NP_523957.1	Gene:	lark / 38811	FlyBaseID:	FBgn0011640	Length:	352	Species:	Drosophila melanogaster
Sequence 2:	NP_001025438.1	Gene:	srsf7b / 572211	ZFINID:	ZDB-GENE-050913-95	Length:	178	Species:	Danio rerio

Alignment Length:	111	Identity:	36/111 - (32%)
Similarity:	58/111 - (52%)	Gaps:	11/111 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly    86 TKIFVGNLTDKTRAPEVRELFQKYGTVVECDIVRN---YGFVHLDCVGDVQDAIKELNGRVVDGQ 147
            ||::||||.......|:...|..||.:....|.||   :.||..:...|.:|:::.|:|:|:.|.
Zfish    11 TKVYVGNLGTGAGKGELERAFGYYGPLRSVWIARNPAGFAFVEFEDPRDAEDSVRGLDGKVICGS 75

  Fly   148 PLKVQVSTSRVR-------PKPGMGDP-EQCYRCGRSGHWSKECPR 185
            .::|::||...|       |.....|| ::||.||..||::.:|.|
Zfish    76 RVRVELSTGMPRRSRYDHPPSRRPFDPNDRCYECGEKGHYAYDCHR 121

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779
		RRM1_2_CoAA_like	87..152	CDD:409779	20/67 (30%)
		hnRNP-R-Q	<88..>258	CDD:273732	34/109 (31%)
srsf7b	NP_001025438.1	RRM	<10..>83	CDD:223796	22/71 (31%)
		RRM_SRSF7	12..88	CDD:241090	23/75 (31%)
		ZnF_C2HC	105..119	CDD:197667	6/13 (46%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910